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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

23 rows where Species_name = "Conus bullatus"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 0 22
  • 1 1

Species_name 1

  • Conus bullatus · 23 ✖

Sequence_status 1

  • observed 23

Is_annotated 1

  • 0 23
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261436 Conus bullatus 52.60663507109 211.0 observed 0 0
BD261437 Conus bullatus 53.7383177570093 214.0 observed 0 0
BD261438 Conus bullatus 54.3269230769231 208.0 observed 0 0
BD261439 Conus bullatus 54.5023696682464 211.0 observed 0 0
DD012696 Conus bullatus 49.738219895288 382.0 observed 0 0
DD012697 Conus bullatus 52.75 400.0 observed 0 0
DD012698 Conus bullatus 51.1873350923483 379.0 observed 0 0
DD012699 Conus bullatus 50.9383378016086 373.0 observed 0 0
DD012700 Conus bullatus 49.2146596858639 382.0 observed 0 0
DD012701 Conus bullatus 51.7426273458445 373.0 observed 0 0
DD101313 Conus bullatus 47.6923076923077 325.0 observed 0 0
DD101314 Conus bullatus 48.7730061349693 326.0 observed 0 0
DD101315 Conus bullatus 48.9425981873112 331.0 observed 0 0
DD101316 Conus bullatus 49.5548961424332 337.0 observed 0 0
DD101317 Conus bullatus 46.5875370919881 337.0 observed 0 0
DD101318 Conus bullatus 44.8916408668731 323.0 observed 0 0
DD101319 Conus bullatus 45.9627329192547 322.0 observed 0 0
DJ379498 Conus bullatus 48.1060606060606 264.0 observed 0 0
DJ379499 Conus bullatus 47.463768115942 276.0 observed 1 0
FB299970 Conus bullatus 52.60663507109 211.0 observed 0 0
FB299972 Conus bullatus 53.7383177570093 214.0 observed 0 0
FB299974 Conus bullatus 54.3269230769231 208.0 observed 0 0
FB299976 Conus bullatus 54.5023696682464 211.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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