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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

17 rows where Species_name = "Conus caracteristicus"

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These facets timed out: Is_annotated, Species_name

Is_protein_coding_sequence 2

  • 0 12
  • 1 5

Sequence_status 1

  • observed 17
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261407 Conus caracteristicus 47.7011494252874 174.0 observed 1 0
BD261408 Conus caracteristicus 52.5114155251142 219.0 observed 0 0
BD261482 Conus caracteristicus 51.7543859649123 114.0 observed 0 0
BD261483 Conus caracteristicus 51.219512195122 123.0 observed 0 0
BD280184 Conus caracteristicus 48.2142857142857 280.0 observed 1 0
DD012702 Conus caracteristicus 46.7289719626168 321.0 observed 0 0
DD101321 Conus caracteristicus 43.9628482972136 323.0 observed 0 0
DD101322 Conus caracteristicus 46.2025316455696 316.0 observed 0 0
DD101323 Conus caracteristicus 47.7707006369427 314.0 observed 0 0
DD101324 Conus caracteristicus 47.6027397260274 292.0 observed 0 0
DD101325 Conus caracteristicus 46.0750853242321 293.0 observed 0 0
DD101326 Conus caracteristicus 50.4310344827586 232.0 observed 1 0
DJ379488 Conus caracteristicus 49.8220640569395 281.0 observed 1 0
FB299912 Conus caracteristicus 47.7011494252874 174.0 observed 1 1
FB299914 Conus caracteristicus 52.5114155251142 219.0 observed 0 0
FB300141 Conus caracteristicus 51.7543859649123 114.0 observed 0 0
FB300143 Conus caracteristicus 51.219512195122 123.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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