home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

18 rows where Species_name = "Conus circumcisus"

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: GC_content, Sequence_length

Species_name 1

  • Conus circumcisus · 18 ✖

Sequence_status 1

  • observed 18

Is_protein_coding_sequence 1

  • 0 18

Is_annotated 1

  • 0 18
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261426 Conus circumcisus 55.7142857142857 210.0 observed 0 0
BD261427 Conus circumcisus 55.3990610328638 213.0 observed 0 0
BD394977 Conus circumcisus 53.9906103286385 213.0 observed 0 0
DD012708 Conus circumcisus 52.9411764705882 374.0 observed 0 0
DD012709 Conus circumcisus 50.3957783641161 379.0 observed 0 0
DD012710 Conus circumcisus 52.2427440633245 379.0 observed 0 0
DD012711 Conus circumcisus 50.131926121372 379.0 observed 0 0
DD101327 Conus circumcisus 42.7244582043344 323.0 observed 0 0
DJ379503 Conus circumcisus 43.4146341463415 205.0 observed 0 0
DJ379504 Conus circumcisus 43.6893203883495 206.0 observed 0 0
DJ379505 Conus circumcisus 44.1747572815534 206.0 observed 0 0
DJ379563 Conus circumcisus 44.6601941747573 206.0 observed 0 0
DJ379564 Conus circumcisus 43.6893203883495 206.0 observed 0 0
DJ379565 Conus circumcisus 44.1747572815534 206.0 observed 0 0
DJ379566 Conus circumcisus 43.6893203883495 206.0 observed 0 0
DJ379567 Conus circumcisus 44.5 200.0 observed 0 0
FB299950 Conus circumcisus 55.7142857142857 210.0 observed 0 0
FB299952 Conus circumcisus 55.3990610328638 213.0 observed 0 0

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 240.857ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT