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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

9 rows where Species_name = "Conus episcopatus"

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Suggested facets: GC_content, Sequence_length

Species_name 1

  • Conus episcopatus · 9 ✖

Sequence_status 1

  • observed 9

Is_protein_coding_sequence 1

  • 0 9

Is_annotated 1

  • 0 9
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261428 Conus episcopatus 51.6908212560386 207.0 observed 0 0
BD261486 Conus episcopatus 54.0540540540541 111.0 observed 0 0
DD101414 Conus episcopatus 45.0511945392491 293.0 observed 0 0
DD101415 Conus episcopatus 46.0750853242321 293.0 observed 0 0
DD101416 Conus episcopatus 47.5862068965517 290.0 observed 0 0
DJ379494 Conus episcopatus 45.25 400.0 observed 0 0
DJ379495 Conus episcopatus 48.7623762376238 404.0 observed 0 0
FB299954 Conus episcopatus 51.6908212560386 207.0 observed 0 0
FB300149 Conus episcopatus 54.0540540540541 111.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 234.653ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT