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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

20 rows where Species_name = "Conus lividus"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261461 Conus lividus 57.6158940397351 151.0 observed 0 0
BD261490 Conus lividus 51.4084507042254 142.0 observed 0 0
BD261491 Conus lividus 56.687898089172 157.0 observed 0 0
BD261492 Conus lividus 56.687898089172 157.0 observed 0 0
BD261493 Conus lividus 57.9617834394904 157.0 observed 0 0
BD261494 Conus lividus 55.4140127388535 157.0 observed 0 0
BD261495 Conus lividus 54.5454545454545 154.0 observed 0 0
BD261496 Conus lividus 49.3506493506493 154.0 observed 0 0
BD261497 Conus lividus 56.687898089172 157.0 observed 0 0
DD101345 Conus lividus 48.7704918032787 244.0 observed 0 0
DJ379491 Conus lividus 46.4788732394366 284.0 observed 1 0
FB300099 Conus lividus 57.6158940397351 151.0 observed 0 0
FB300157 Conus lividus 51.4084507042254 142.0 observed 0 0
FB300159 Conus lividus 56.687898089172 157.0 observed 0 0
FB300161 Conus lividus 56.687898089172 157.0 observed 0 0
FB300163 Conus lividus 57.9617834394904 157.0 observed 0 0
FB300165 Conus lividus 55.4140127388535 157.0 observed 0 0
FB300167 Conus lividus 54.5454545454545 154.0 observed 0 0
FB300169 Conus lividus 49.3506493506493 154.0 observed 0 0
FB300171 Conus lividus 56.687898089172 157.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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