home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

25 rows where Species_name = "Conus marmoreus"

✎ View and edit SQL

This data as json, CSV (advanced)

These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD138585 Conus marmoreus 45.6834532374101 278.0 observed 1 0
BD138586 Conus marmoreus 47.3867595818815 287.0 observed 1 0
BD138587 Conus marmoreus 45.3237410071942 278.0 observed 0 0
BD261498 Conus marmoreus 51.5873015873016 126.0 observed 0 0
BD261499 Conus marmoreus 52.991452991453 117.0 observed 0 0
DD101352 Conus marmoreus 47.9750778816199 321.0 observed 0 0
DD101353 Conus marmoreus 48.6486486486486 296.0 observed 0 0
DD101354 Conus marmoreus 51.830985915493 355.0 observed 0 0
DD101355 Conus marmoreus 47.7966101694915 295.0 observed 0 0
DD101356 Conus marmoreus 51.063829787234 235.0 observed 0 0
DD101357 Conus marmoreus 49.859943977591 357.0 observed 0 0
DJ379414 Conus marmoreus 52.588996763754 618.0 observed 0 0
DJ379415 Conus marmoreus 46.6216216216216 444.0 observed 0 0
DJ379421 Conus marmoreus 45.2479338842975 484.0 observed 0 0
DJ379422 Conus marmoreus 46.8384074941452 427.0 observed 0 0
DJ379423 Conus marmoreus 44.8936170212766 470.0 observed 0 0
DJ379424 Conus marmoreus 48.2978723404255 470.0 observed 0 0
DJ379428 Conus marmoreus 53.1386861313869 685.0 observed 0 0
DJ379458 Conus marmoreus 46.0280373831776 428.0 observed 0 0
DJ379459 Conus marmoreus 43.1718061674009 227.0 observed 1 0
DJ379460 Conus marmoreus 49.1428571428571 525.0 observed 0 0
DJ379461 Conus marmoreus 49.7206703910615 537.0 observed 0 0
DJ379479 Conus marmoreus 48.5119047619048 336.0 observed 0 0
FB300173 Conus marmoreus 51.5873015873016 126.0 observed 0 0
FB300175 Conus marmoreus 52.991452991453 117.0 observed 0 0

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 4518.143ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT