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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

16 rows where Species_name = "Conus obscurus"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261502 Conus obscurus 53.2467532467533 154.0 observed 0 0
BD261503 Conus obscurus 52.317880794702 151.0 observed 0 0
BD261504 Conus obscurus 50.6912442396313 217.0 observed 0 0
BD261505 Conus obscurus 52.8846153846154 208.0 observed 0 0
BD261506 Conus obscurus 49.3087557603687 217.0 observed 0 0
BD394988 Conus obscurus 46.4788732394366 142.0 observed 0 0
DD012747 Conus obscurus 51.937984496124 258.0 observed 0 0
DD012748 Conus obscurus 49.8069498069498 259.0 observed 0 0
DJ379418 Conus obscurus 47.0 200.0 observed 1 0
DJ379463 Conus obscurus 44.811320754717 212.0 observed 0 0
DJ379473 Conus obscurus 47.5728155339806 206.0 observed 0 0
FB300181 Conus obscurus 53.2467532467533 154.0 observed 0 0
FB300183 Conus obscurus 52.317880794702 151.0 observed 0 0
FB300185 Conus obscurus 50.6912442396313 217.0 observed 0 0
FB300187 Conus obscurus 52.8846153846154 208.0 observed 0 0
FB300189 Conus obscurus 49.3087557603687 217.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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