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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

18 rows where Species_name = "Conus purpurascens"

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Species_name 1

  • Conus purpurascens · 18 ✖

Sequence_status 1

  • observed 18

Is_protein_coding_sequence 1

  • 0 18

Is_annotated 1

  • 0 18
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261453 Conus purpurascens 57.4324324324324 148.0 observed 0 0
BD261512 Conus purpurascens 54.3046357615894 151.0 observed 0 0
BD261513 Conus purpurascens 53.75 160.0 observed 0 0
BD261514 Conus purpurascens 51.6556291390729 151.0 observed 0 0
BD261515 Conus purpurascens 54.9295774647887 142.0 observed 0 0
BD394992 Conus purpurascens 54.6511627906977 172.0 observed 0 0
BD394993 Conus purpurascens 50.4545454545455 220.0 observed 0 0
BD394997 Conus purpurascens 51.7699115044248 226.0 observed 0 0
DD012750 Conus purpurascens 54.6099290780142 282.0 observed 0 0
DD012751 Conus purpurascens 50.8823529411765 340.0 observed 0 0
DD012752 Conus purpurascens 54.2586750788643 317.0 observed 0 0
DJ379433 Conus purpurascens 47.8155339805825 412.0 observed 0 0
DJ379439 Conus purpurascens 50.3676470588235 272.0 observed 0 0
FB300083 Conus purpurascens 57.4324324324324 148.0 observed 0 0
FB300201 Conus purpurascens 54.3046357615894 151.0 observed 0 0
FB300203 Conus purpurascens 53.75 160.0 observed 0 0
FB300205 Conus purpurascens 51.6556291390729 151.0 observed 0 0
FB300207 Conus purpurascens 54.9295774647887 142.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 1999.692ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT