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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

18 rows where Species_name = "Crenarchaeota"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CQ786497 Crenarchaeota 40.0353721444363 33925.0 observed 0 0
CQ786498 Crenarchaeota 34.0092944655682 2367.0 observed 1 0
CQ786500 Crenarchaeota 32.8798185941043 882.0 observed 1 0
CQ786502 Crenarchaeota 35.8490566037736 318.0 observed 1 0
CQ786504 Crenarchaeota 33.1491712707182 1086.0 observed 1 0
CQ786506 Crenarchaeota 29.7250859106529 582.0 observed 1 0
CQ786508 Crenarchaeota 43.37899543379 438.0 observed 1 0
CQ786510 Crenarchaeota 37.1584699453552 915.0 observed 1 0
CQ786512 Crenarchaeota 38.9479905437352 1692.0 observed 1 0
CQ786514 Crenarchaeota 38.1381381381381 666.0 observed 1 0
CQ786516 Crenarchaeota 38.036303630363 1212.0 observed 1 0
CQ786518 Crenarchaeota 38.9175257731959 1164.0 observed 1 0
CQ786520 Crenarchaeota 44.2176870748299 882.0 observed 1 0
CQ786522 Crenarchaeota 41.4330218068536 1284.0 observed 1 0
CQ786524 Crenarchaeota 43.3972310969116 1878.0 observed 1 0
CQ786526 Crenarchaeota 49.7319034852547 2238.0 observed 1 0
CQ786528 Crenarchaeota 34.1040462427746 519.0 observed 1 0
CQ786530 Crenarchaeota 47.2222222222222 1008.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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