Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
32 rows where Species_name = "Crocosphaera subtropica"
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Suggested facets: Sequence_length
Species_name 1
- Crocosphaera subtropica · 32 ✖
Sequence_status 1
- predicted 32
Is_protein_coding_sequence 1
- 1 32
Is_annotated 1
- 1 32
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| DI356691 | Crocosphaera subtropica | 42.8985507246377 | 690.0 | predicted | 1 | 1 |
| DI356692 | Crocosphaera subtropica | 38.4728340675477 | 681.0 | predicted | 1 | 1 |
| DI356693 | Crocosphaera subtropica | 41.743119266055 | 654.0 | predicted | 1 | 1 |
| HI699462 | Crocosphaera subtropica | 44.0761203192142 | 1629.0 | predicted | 1 | 1 |
| HJ398476 | Crocosphaera subtropica | 41.7378917378917 | 702.0 | predicted | 1 | 1 |
| HK082733 | Crocosphaera subtropica | 44.9709060681629 | 1203.0 | predicted | 1 | 1 |
| HK084132 | Crocosphaera subtropica | 46.6947960618847 | 711.0 | predicted | 1 | 1 |
| HK085530 | Crocosphaera subtropica | 44.3196004993758 | 801.0 | predicted | 1 | 1 |
| HK128845 | Crocosphaera subtropica | 43.6536180308422 | 1686.0 | predicted | 1 | 1 |
| HK149641 | Crocosphaera subtropica | 40.5172413793103 | 696.0 | predicted | 1 | 1 |
| HK149657 | Crocosphaera subtropica | 40.8602150537634 | 1023.0 | predicted | 1 | 1 |
| HK189728 | Crocosphaera subtropica | 41.2619344126193 | 2409.0 | predicted | 1 | 1 |
| HK190550 | Crocosphaera subtropica | 33.6671435383882 | 2097.0 | predicted | 1 | 1 |
| HK287061 | Crocosphaera subtropica | 36.3475177304965 | 1128.0 | predicted | 1 | 1 |
| HK355159 | Crocosphaera subtropica | 52.6881720430108 | 1023.0 | predicted | 1 | 1 |
| HK355160 | Crocosphaera subtropica | 49.5689655172414 | 696.0 | predicted | 1 | 1 |
| HK416327 | Crocosphaera subtropica | 44.4246737841044 | 1686.0 | predicted | 1 | 1 |
| HK716495 | Crocosphaera subtropica | 49.645390070922 | 705.0 | predicted | 1 | 1 |
| HL887313 | Crocosphaera subtropica | 45.5266138165345 | 2649.0 | predicted | 1 | 1 |
| HL887346 | Crocosphaera subtropica | 34.4682230869001 | 3084.0 | predicted | 1 | 1 |
| LG087071 | Crocosphaera subtropica | 67.0731707317073 | 984.0 | predicted | 1 | 1 |
| LG087073 | Crocosphaera subtropica | 29.6875 | 1536.0 | predicted | 1 | 1 |
| MM422761 | Crocosphaera subtropica | 35.4354354354354 | 999.0 | predicted | 1 | 1 |
| MM422762 | Crocosphaera subtropica | 36.0810810810811 | 740.0 | predicted | 1 | 1 |
| MM422763 | Crocosphaera subtropica | 35.2 | 750.0 | predicted | 1 | 1 |
| MM422764 | Crocosphaera subtropica | 35.1791530944625 | 921.0 | predicted | 1 | 1 |
| MM422765 | Crocosphaera subtropica | 35.1791530944625 | 921.0 | predicted | 1 | 1 |
| MM422766 | Crocosphaera subtropica | 35.3159851301115 | 807.0 | predicted | 1 | 1 |
| MM422767 | Crocosphaera subtropica | 34.863523573201 | 806.0 | predicted | 1 | 1 |
| MX357198 | Crocosphaera subtropica | 45.1219512195122 | 984.0 | predicted | 1 | 1 |
| OI026261 | Crocosphaera subtropica | 53.0077848549186 | 1413.0 | predicted | 1 | 1 |
| OI026262 | Crocosphaera subtropica | 53.0785562632696 | 1413.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);