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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

83 rows where Species_name = "Crypthecodinium cohnii"

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These facets timed out: Sequence_status, Is_annotated, Species_name

Is_protein_coding_sequence 2

  • 1 53
  • 0 30
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX214452 Crypthecodinium cohnii 55.6497175141243 708.0 observed 1 0
CQ891262 Crypthecodinium cohnii 57.1656050955414 628.0 observed 0 0
CQ891264 Crypthecodinium cohnii 54.9528301886792 1272.0 observed 0 0
CQ891266 Crypthecodinium cohnii 57.1428571428571 448.0 observed 0 0
CS020093 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
CS020095 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
CS160861 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
CS160863 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
CS486283 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
CS486285 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
DD467626 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
DD467627 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
DI179480 Crypthecodinium cohnii 55.4467564259486 817.0 observed 1 0
DI179481 Crypthecodinium cohnii 54.0 850.0 observed 0 0
DI179482 Crypthecodinium cohnii 52.0361990950226 663.0 observed 0 0
DI179483 Crypthecodinium cohnii 54.275092936803 807.0 observed 0 0
DI179484 Crypthecodinium cohnii 55.4248366013072 765.0 observed 0 0
DI179485 Crypthecodinium cohnii 56.6496163682864 782.0 observed 1 0
DI179486 Crypthecodinium cohnii 54.6027742749054 793.0 observed 0 0
DI179487 Crypthecodinium cohnii 56.7204301075269 744.0 observed 0 0
DJ418302 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
DJ418303 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
FB790316 Crypthecodinium cohnii 58.7962962962963 1944.0 observed 1 1
FB849011 Crypthecodinium cohnii 58.7962962962963 1944.0 observed 1 0
FU768048 Crypthecodinium cohnii 55.4467564259486 817.0 observed 1 0
FU768049 Crypthecodinium cohnii 54.0 850.0 observed 0 0
FU768050 Crypthecodinium cohnii 52.0361990950226 663.0 observed 0 0
FU768051 Crypthecodinium cohnii 54.275092936803 807.0 observed 0 0
FU768052 Crypthecodinium cohnii 55.4248366013072 765.0 observed 0 0
FU768053 Crypthecodinium cohnii 56.6496163682864 782.0 observed 1 0
FU768054 Crypthecodinium cohnii 54.6027742749054 793.0 observed 0 0
FU768055 Crypthecodinium cohnii 56.7204301075269 744.0 observed 0 0
HB660375 Crypthecodinium cohnii 58.7962962962963 1944.0 observed 1 0
HB719070 Crypthecodinium cohnii 58.7962962962963 1944.0 observed 1 0
HC475522 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC475524 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC475714 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC475716 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC475906 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC475908 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC476098 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC476100 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC476290 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC476292 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC476482 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC476484 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC476674 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC476676 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC482033 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC482035 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC482225 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC482227 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HC491189 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HC491191 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HV338459 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HV338460 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
HW249630 Crypthecodinium cohnii 55.4467564259486 817.0 observed 1 0
HW249631 Crypthecodinium cohnii 54.0 850.0 observed 0 0
HW249632 Crypthecodinium cohnii 52.0361990950226 663.0 observed 0 0
HW249633 Crypthecodinium cohnii 54.275092936803 807.0 observed 0 0
HW249634 Crypthecodinium cohnii 55.4248366013072 765.0 observed 0 0
HW249635 Crypthecodinium cohnii 56.6496163682864 782.0 observed 1 0
HW249636 Crypthecodinium cohnii 54.6027742749054 793.0 observed 0 0
HW249637 Crypthecodinium cohnii 56.7204301075269 744.0 observed 0 0
HW529471 Crypthecodinium cohnii 55.4467564259486 817.0 observed 1 0
HW529472 Crypthecodinium cohnii 54.0 850.0 observed 0 0
HW529473 Crypthecodinium cohnii 52.0361990950226 663.0 observed 0 0
HW529474 Crypthecodinium cohnii 54.275092936803 807.0 observed 0 0
HW529475 Crypthecodinium cohnii 55.4248366013072 765.0 observed 0 0
HW529476 Crypthecodinium cohnii 56.6496163682864 782.0 observed 1 0
HW529477 Crypthecodinium cohnii 54.6027742749054 793.0 observed 0 0
HW529478 Crypthecodinium cohnii 56.7204301075269 744.0 observed 0 0
HW603271 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
HW603272 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
JB624865 Crypthecodinium cohnii 50.7407407407407 270.0 observed 0 0
LF948712 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
LF948713 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0
LP738625 Crypthecodinium cohnii 61.357154839792 47688.0 observed 1 0
LP738626 Crypthecodinium cohnii 61.2982074959261 47866.0 observed 0 0
LP738629 Crypthecodinium cohnii 57.5091575091575 273.0 observed 1 0
LQ299420 Crypthecodinium cohnii 50.7407407407407 270.0 observed 0 0
MA815878 Crypthecodinium cohnii 56.3034188034188 936.0 observed 1 0
MA815879 Crypthecodinium cohnii 56.7421790722762 927.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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