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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

38 rows where Species_name = "Diacronema lutheri"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 1 20
  • 0 18

Is_annotated 2

  • 0 37
  • 1 1

Species_name 1

  • Diacronema lutheri · 38 ✖

Sequence_status 1

  • observed 38
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS247049 Diacronema lutheri 66.0687593423019 1338.0 observed 1 1
DL074857 Diacronema lutheri 66.0687593423019 1338.0 observed 1 0
FB706296 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
FB706297 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
FB706306 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
FB706307 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
FB706308 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
FB709647 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
FB709682 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
FB709683 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
FB709691 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
FB709692 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
FB717578 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
FB717615 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
FB717616 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
FB717624 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
FB717625 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
FB719737 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
FB719774 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
FB719775 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
FB719783 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
FB719784 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
FB741678 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
FB741713 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
FB741714 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
FB741722 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
FB741723 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
FW503487 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
GM060281 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
GM716020 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
GM840484 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
JA729919 Diacronema lutheri 63.0215827338129 695.0 observed 1 0
JA729920 Diacronema lutheri 60.2169981916817 1106.0 observed 0 0
JA729929 Diacronema lutheri 59.5826893353941 1294.0 observed 0 0
JA729930 Diacronema lutheri 58.8479501816295 1927.0 observed 0 0
JA729931 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
JB318705 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0
JB330141 Diacronema lutheri 62.5689519306541 1269.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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