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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

35 rows where Species_name = "Dosidicus gigas"

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These facets timed out: Sequence_status, Is_annotated, Species_name

Is_protein_coding_sequence 2

  • 1 34
  • 0 1
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
JE831343 Dosidicus gigas 51.2418300653595 765.0 observed 1 1
JE831344 Dosidicus gigas 51.261620185923 753.0 observed 1 1
JE831345 Dosidicus gigas 51.1111111111111 765.0 observed 1 1
JE831346 Dosidicus gigas 50.314465408805 636.0 observed 1 1
JE831347 Dosidicus gigas 51.2820512820513 741.0 observed 1 0
JE831348 Dosidicus gigas 51.5075376884422 1194.0 observed 1 1
JE831349 Dosidicus gigas 51.9668737060041 966.0 observed 1 0
JE831350 Dosidicus gigas 52.9498525073746 678.0 observed 1 0
JE831351 Dosidicus gigas 52.4264120922832 1257.0 observed 1 0
JE831352 Dosidicus gigas 51.0582010582011 756.0 observed 1 0
JE831353 Dosidicus gigas 52.8735632183908 783.0 observed 1 0
JE831354 Dosidicus gigas 52.5157232704403 1590.0 observed 1 0
JE831355 Dosidicus gigas 52.4857375713121 1227.0 observed 1 0
JE831356 Dosidicus gigas 52.6209677419355 1488.0 observed 1 0
JE831357 Dosidicus gigas 52.5641025641026 1794.0 observed 1 0
JE831358 Dosidicus gigas 48.12734082397 534.0 observed 1 1
JE831359 Dosidicus gigas 49.5384615384615 975.0 observed 1 1
JE831360 Dosidicus gigas 49.8708010335917 387.0 observed 1 0
JE831361 Dosidicus gigas 49.4535519125683 366.0 observed 1 0
JE831362 Dosidicus gigas 48.1684981684982 546.0 observed 1 1
JE831363 Dosidicus gigas 52.8942115768463 501.0 observed 1 1
JE831364 Dosidicus gigas 50.3311258278146 453.0 observed 1 1
JE831365 Dosidicus gigas 49.8148148148148 540.0 observed 1 1
JE831366 Dosidicus gigas 50.5524861878453 1086.0 observed 1 1
JE831367 Dosidicus gigas 51.4102564102564 780.0 observed 1 1
JE831368 Dosidicus gigas 51.2418300653595 765.0 observed 1 1
JE831369 Dosidicus gigas 51.0666666666667 750.0 observed 1 1
JE831370 Dosidicus gigas 52.991452991453 351.0 observed 1 0
JE831371 Dosidicus gigas 51.6363636363636 825.0 observed 1 1
JE831372 Dosidicus gigas 51.3302034428795 639.0 observed 1 0
JE831373 Dosidicus gigas 48.2517482517483 429.0 observed 1 1
JE831374 Dosidicus gigas 51.4285714285714 945.0 observed 1 0
JE831375 Dosidicus gigas 51.3713080168776 948.0 observed 1 0
JE831376 Dosidicus gigas 55.8558558558559 222.0 observed 1 0
JE831377 Dosidicus gigas 49.0716180371353 1131.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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