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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

44 rows where Species_name = "Dunaliella salina"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 1 42
  • 0 2

Is_annotated 2

  • 0 24
  • 1 20

Species_name 1

  • Dunaliella salina · 44 ✖

Sequence_status 1

  • observed 44
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI490313 Dunaliella salina 55.7986870897155 1371.0 observed 1 1
DI490314 Dunaliella salina 56.156862745098 1275.0 observed 1 1
FB335838 Dunaliella salina 52.3232323232323 495.0 observed 1 1
FB790314 Dunaliella salina 56.0163850486431 1953.0 observed 1 1
FB790320 Dunaliella salina 58.955223880597 2010.0 observed 1 1
FB790330 Dunaliella salina 59.2647789369101 2013.0 observed 1 1
FB849009 Dunaliella salina 56.0163850486431 1953.0 observed 1 0
FB849015 Dunaliella salina 58.955223880597 2010.0 observed 1 0
FB849025 Dunaliella salina 59.2647789369101 2013.0 observed 1 0
FB920437 Dunaliella salina 62.033462033462 777.0 observed 1 1
GM044321 Dunaliella salina 58.9178356713427 1497.0 observed 1 0
GM044323 Dunaliella salina 59.9520383693046 1668.0 observed 1 0
GM044333 Dunaliella salina 52.4858757062147 1770.0 observed 1 0
GM966136 Dunaliella salina 58.4567901234568 1620.0 observed 1 1
GN117636 Dunaliella salina 57.2390572390572 1485.0 observed 0 0
HB660373 Dunaliella salina 56.0163850486431 1953.0 observed 1 0
HB660379 Dunaliella salina 58.955223880597 2010.0 observed 1 0
HB660389 Dunaliella salina 59.2647789369101 2013.0 observed 1 0
HB719068 Dunaliella salina 56.0163850486431 1953.0 observed 1 0
HB719074 Dunaliella salina 58.955223880597 2010.0 observed 1 0
HB719084 Dunaliella salina 59.2647789369101 2013.0 observed 1 0
HB790496 Dunaliella salina 62.033462033462 777.0 observed 1 0
HC894007 Dunaliella salina 55.7093425605536 1734.0 observed 0 0
HH767177 Dunaliella salina 52.3232323232323 495.0 observed 1 0
HH768825 Dunaliella salina 60.8583055863855 2703.0 observed 1 1
HH993591 Dunaliella salina 53.025641025641 975.0 observed 1 1
HH993592 Dunaliella salina 54.4351073762838 1071.0 observed 1 1
HH993593 Dunaliella salina 59.7701149425287 1044.0 observed 1 1
HH993594 Dunaliella salina 58.4845250800427 2811.0 observed 1 0
HH993595 Dunaliella salina 53.5087719298246 342.0 observed 1 1
HW823297 Dunaliella salina 58.5760517799353 2163.0 observed 1 0
JB762813 Dunaliella salina 58.9178356713427 1497.0 observed 1 1
JB762815 Dunaliella salina 59.9520383693046 1668.0 observed 1 1
JB762825 Dunaliella salina 52.4858757062147 1770.0 observed 1 1
JC426559 Dunaliella salina 62.8691983122363 237.0 observed 1 1
JE993488 Dunaliella salina 58.5760517799353 2163.0 observed 1 0
LY268118 Dunaliella salina 51.7070142768467 1611.0 observed 1 1
LY268119 Dunaliella salina 50.5660377358491 795.0 observed 1 1
LY268120 Dunaliella salina 52.5547445255474 822.0 observed 1 1
LY565927 Dunaliella salina 51.7070142768467 1611.0 observed 1 0
LY565928 Dunaliella salina 53.2183908045977 870.0 observed 1 0
LY565929 Dunaliella salina 51.4827995255041 843.0 observed 1 0
MC427871 Dunaliella salina 58.5760517799353 2163.0 observed 1 0
MP262376 Dunaliella salina 58.5760517799353 2163.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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