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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

19 rows where Species_name = "Erythrobacter litoralis htcc2594"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS475897 Erythrobacter litoralis htcc2594 66.1518661518662 777.0 observed 1 0
CS498120 Erythrobacter litoralis htcc2594 66.1518661518662 777.0 observed 1 0
FB332649 Erythrobacter litoralis htcc2594 64.0198511166253 1209.0 observed 1 1
FB332651 Erythrobacter litoralis htcc2594 63.4646962233169 1218.0 observed 1 1
HB967994 Erythrobacter litoralis htcc2594 62.9090909090909 1650.0 observed 1 1
HB968345 Erythrobacter litoralis htcc2594 64.5977011494253 870.0 observed 1 1
HB971016 Erythrobacter litoralis htcc2594 61.2535612535613 702.0 observed 1 1
HB974211 Erythrobacter litoralis htcc2594 65.1898734177215 948.0 observed 1 1
HC904402 Erythrobacter litoralis htcc2594 61.9285120532003 1203.0 observed 1 1
HC906633 Erythrobacter litoralis htcc2594 65.9259259259259 675.0 observed 1 1
HC907383 Erythrobacter litoralis htcc2594 59.7560975609756 984.0 observed 1 1
HC909450 Erythrobacter litoralis htcc2594 64.968152866242 471.0 observed 1 1
HD025404 Erythrobacter litoralis htcc2594 62.9090909090909 1650.0 observed 1 0
HD025755 Erythrobacter litoralis htcc2594 64.5977011494253 870.0 observed 1 0
HD028426 Erythrobacter litoralis htcc2594 61.2535612535613 702.0 observed 1 0
HD031621 Erythrobacter litoralis htcc2594 65.1898734177215 948.0 observed 1 0
HH763988 Erythrobacter litoralis htcc2594 64.0198511166253 1209.0 observed 1 0
HH763990 Erythrobacter litoralis htcc2594 63.4646962233169 1218.0 observed 1 0
HV120269 Erythrobacter litoralis htcc2594 66.1518661518662 777.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 3605.108ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT