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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

25 rows where Species_name = "Flavobacterium branchiophilum"

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Suggested facets: Sequence_length

Species_name 1

  • Flavobacterium branchiophilum · 25 ✖

Sequence_status 1

  • predicted 25

Is_protein_coding_sequence 1

  • 1 25

Is_annotated 1

  • 1 25
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
LY767487 Flavobacterium branchiophilum 59.4979647218453 4422.0 predicted 1 1
LY768647 Flavobacterium branchiophilum 44.1881501582994 4422.0 predicted 1 1
LY769807 Flavobacterium branchiophilum 46.7661691542289 4422.0 predicted 1 1
LY770967 Flavobacterium branchiophilum 34.8484848484849 4422.0 predicted 1 1
LY772127 Flavobacterium branchiophilum 46.40434192673 4422.0 predicted 1 1
LY774447 Flavobacterium branchiophilum 35.119855269109 4422.0 predicted 1 1
LY776189 Flavobacterium branchiophilum 23.0234578627281 3453.0 predicted 1 1
LY776309 Flavobacterium branchiophilum 53.5766000579207 3453.0 predicted 1 1
LY776427 Flavobacterium branchiophilum 38.3434694468578 3453.0 predicted 1 1
LY776545 Flavobacterium branchiophilum 40.6023747465972 3453.0 predicted 1 1
LY776663 Flavobacterium branchiophilum 32.1459600347524 3453.0 predicted 1 1
LY776781 Flavobacterium branchiophilum 40.5734144222415 3453.0 predicted 1 1
LY777017 Flavobacterium branchiophilum 31.8563567911961 3453.0 predicted 1 1
LY922235 Flavobacterium branchiophilum 30.1491028556988 3957.0 predicted 1 1
LY922255 Flavobacterium branchiophilum 38.8172858225929 3957.0 predicted 1 1
LY922322 Flavobacterium branchiophilum 34.5463735152894 3957.0 predicted 1 1
LY922342 Flavobacterium branchiophilum 42.279504675259 3957.0 predicted 1 1
LY922535 Flavobacterium branchiophilum 39.4743492544857 3957.0 predicted 1 1
MI436537 Flavobacterium branchiophilum 44.0485216072782 3957.0 predicted 1 1
MV660045 Flavobacterium branchiophilum 31.0277777777778 3600.0 predicted 1 1
MV660652 Flavobacterium branchiophilum 30.1608579088472 2238.0 predicted 1 1
MV661195 Flavobacterium branchiophilum 35.3510895883777 3717.0 predicted 1 1
MV661881 Flavobacterium branchiophilum 33.4797462176672 2049.0 predicted 1 1
MV662292 Flavobacterium branchiophilum 26.3294422827497 771.0 predicted 1 1
MV662756 Flavobacterium branchiophilum 28.3154121863799 558.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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