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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

68 rows where Species_name = "Guillardia theta"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 1 60
  • 0 8

Is_annotated 2

  • 0 48
  • 1 20

Species_name 1

  • Guillardia theta · 68 ✖

Sequence_status 1

  • observed 68
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD395536 Guillardia theta 30.3030303030303 330.0 observed 0 0
BD395537 Guillardia theta 30.3030303030303 330.0 observed 0 0
GM961354 Guillardia theta 24.0963855421687 249.0 observed 1 1
HB462041 Guillardia theta 23.6947791164659 249.0 observed 1 1
HB871159 Guillardia theta 36.2869198312236 1896.0 observed 1 1
HB871609 Guillardia theta 24.0963855421687 249.0 observed 1 0
HB875928 Guillardia theta 32.5490196078431 765.0 observed 1 1
HB878366 Guillardia theta 32.5490196078431 765.0 observed 1 0
HB879055 Guillardia theta 32.5490196078431 765.0 observed 1 0
HB879470 Guillardia theta 24.0963855421687 249.0 observed 1 0
HB885677 Guillardia theta 36.2869198312236 1896.0 observed 1 0
HB889315 Guillardia theta 24.0963855421687 249.0 observed 1 0
HB899261 Guillardia theta 32.4074074074074 432.0 observed 1 1
HB905208 Guillardia theta 38.2629107981221 426.0 observed 1 1
HB910108 Guillardia theta 32.4074074074074 432.0 observed 1 0
HB921921 Guillardia theta 38.2629107981221 426.0 observed 1 0
HB932232 Guillardia theta 32.4074074074074 432.0 observed 1 0
HB934668 Guillardia theta 31.0502283105023 219.0 observed 1 1
HB949011 Guillardia theta 32.4074074074074 432.0 observed 1 0
HB949883 Guillardia theta 35.5902777777778 1728.0 observed 1 1
HB951040 Guillardia theta 38.2629107981221 426.0 observed 1 0
HB953742 Guillardia theta 32.4074074074074 432.0 observed 1 0
HB957073 Guillardia theta 32.4074074074074 432.0 observed 1 0
HC924922 Guillardia theta 23.6947791164659 249.0 observed 1 0
HC925761 Guillardia theta 24.0963855421687 249.0 observed 1 0
HC927982 Guillardia theta 25.6080114449213 699.0 observed 1 1
HC928568 Guillardia theta 36.2869198312236 1896.0 observed 1 0
HC929018 Guillardia theta 24.0963855421687 249.0 observed 1 0
HC929960 Guillardia theta 19.8879551820728 357.0 observed 1 1
HC932313 Guillardia theta 19.8879551820728 357.0 observed 1 0
HC933337 Guillardia theta 32.5490196078431 765.0 observed 1 0
HC935775 Guillardia theta 32.5490196078431 765.0 observed 1 0
HC936464 Guillardia theta 32.5490196078431 765.0 observed 1 0
HC936879 Guillardia theta 24.0963855421687 249.0 observed 1 0
HC946724 Guillardia theta 24.0963855421687 249.0 observed 1 0
HC956670 Guillardia theta 32.4074074074074 432.0 observed 1 0
HC962617 Guillardia theta 38.2629107981221 426.0 observed 1 0
HC967517 Guillardia theta 32.4074074074074 432.0 observed 1 0
HC979330 Guillardia theta 38.2629107981221 426.0 observed 1 0
HC989641 Guillardia theta 32.4074074074074 432.0 observed 1 0
HC992077 Guillardia theta 31.0502283105023 219.0 observed 1 0
HD006421 Guillardia theta 32.4074074074074 432.0 observed 1 0
HD007293 Guillardia theta 35.5902777777778 1728.0 observed 1 0
HD008450 Guillardia theta 38.2629107981221 426.0 observed 1 0
HD011152 Guillardia theta 32.4074074074074 432.0 observed 1 0
HD014483 Guillardia theta 32.4074074074074 432.0 observed 1 0
HH770875 Guillardia theta 21.558872305141 603.0 observed 1 1
HV814808 Guillardia theta 30.3030303030303 330.0 observed 0 0
HV814809 Guillardia theta 30.3030303030303 330.0 observed 0 0
HW645971 Guillardia theta 30.3030303030303 330.0 observed 0 0
HW645972 Guillardia theta 30.3030303030303 330.0 observed 0 0
JC186750 Guillardia theta 30.3030303030303 330.0 observed 0 0
JC186751 Guillardia theta 30.3030303030303 330.0 observed 0 0
LF158468 Guillardia theta 51.6170763260026 2319.0 observed 1 1
MA360966 Guillardia theta 59.4350282485876 885.0 observed 1 1
MA360967 Guillardia theta 60.8247422680412 873.0 observed 1 1
MA360968 Guillardia theta 59.375 864.0 observed 1 1
MD245489 Guillardia theta 57.4023614895549 1101.0 observed 1 1
MD245490 Guillardia theta 56.8100358422939 1116.0 observed 1 1
MD245491 Guillardia theta 58.0381471389646 1101.0 observed 1 1
MD245492 Guillardia theta 57.8853046594982 1116.0 observed 1 1
MQ124726 Guillardia theta 57.4023614895549 1101.0 observed 1 0
MQ124728 Guillardia theta 56.8100358422939 1116.0 observed 1 0
MQ124729 Guillardia theta 58.0381471389646 1101.0 observed 1 0
MQ124730 Guillardia theta 57.8853046594982 1116.0 observed 1 0
PA260629 Guillardia theta 55.6567957479119 1317.0 observed 1 1
PA277299 Guillardia theta 57.4023614895549 1101.0 observed 1 0
PA541788 Guillardia theta 55.6567957479119 1317.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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