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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

30 rows where Species_name = "Hippocampus comes"

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Suggested facets: GC_content, Sequence_length

Species_name 1

  • Hippocampus comes · 30 ✖

Sequence_status 1

  • predicted 30

Is_protein_coding_sequence 1

  • 1 30

Is_annotated 1

  • 1 30
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HL240793 Hippocampus comes 60.5042016806723 357.0 predicted 1 1
HL245280 Hippocampus comes 52.6610644257703 357.0 predicted 1 1
HL249767 Hippocampus comes 61.3445378151261 357.0 predicted 1 1
HL254254 Hippocampus comes 54.0616246498599 357.0 predicted 1 1
HL258741 Hippocampus comes 50.7002801120448 357.0 predicted 1 1
LF450726 Hippocampus comes 60.8974358974359 156.0 predicted 1 1
LF463778 Hippocampus comes 58.1699346405229 306.0 predicted 1 1
LF467582 Hippocampus comes 56.4476885644769 411.0 predicted 1 1
LF467704 Hippocampus comes 56.7251461988304 171.0 predicted 1 1
LF486124 Hippocampus comes 48.7179487179487 156.0 predicted 1 1
LF499176 Hippocampus comes 48.0392156862745 306.0 predicted 1 1
LF502980 Hippocampus comes 47.6885644768856 411.0 predicted 1 1
LF503102 Hippocampus comes 49.7076023391813 171.0 predicted 1 1
LF521522 Hippocampus comes 60.8974358974359 156.0 predicted 1 1
LF534574 Hippocampus comes 56.5359477124183 306.0 predicted 1 1
LF538378 Hippocampus comes 58.1508515815085 411.0 predicted 1 1
LF538500 Hippocampus comes 59.0643274853801 171.0 predicted 1 1
LF556920 Hippocampus comes 54.4871794871795 156.0 predicted 1 1
LF569972 Hippocampus comes 48.3660130718954 306.0 predicted 1 1
LF573776 Hippocampus comes 50.6082725060827 411.0 predicted 1 1
LF573898 Hippocampus comes 49.7076023391813 171.0 predicted 1 1
LF592318 Hippocampus comes 47.4358974358974 156.0 predicted 1 1
LF605370 Hippocampus comes 46.7320261437908 306.0 predicted 1 1
LF609174 Hippocampus comes 46.9586374695864 411.0 predicted 1 1
LF609296 Hippocampus comes 51.4619883040936 171.0 predicted 1 1
MY240121 Hippocampus comes 56.140350877193 171.0 predicted 1 1
MY253178 Hippocampus comes 64.9122807017544 171.0 predicted 1 1
MY266235 Hippocampus comes 64.9122807017544 171.0 predicted 1 1
MY279292 Hippocampus comes 50.8771929824561 171.0 predicted 1 1
MY292349 Hippocampus comes 52.6315789473684 171.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 268.755ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT