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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

60 rows where Species_name = "Marinobacter nauticus"

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These facets timed out: Is_annotated, Species_name

Sequence_status 1

  • predicted 60

Is_protein_coding_sequence 1

  • 1 60
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HH204832 Marinobacter nauticus 60.4430379746835 948.0 predicted 1 1
HJ187704 Marinobacter nauticus 51.9965277777778 3456.0 predicted 1 1
HJ399103 Marinobacter nauticus 58.9970501474926 678.0 predicted 1 1
HK128791 Marinobacter nauticus 60.8228980322004 1677.0 predicted 1 1
HK190100 Marinobacter nauticus 54.4715447154472 984.0 predicted 1 1
HK190451 Marinobacter nauticus 58.9136490250696 2154.0 predicted 1 1
HK200146 Marinobacter nauticus 48.7029831387808 1542.0 predicted 1 1
HK452645 Marinobacter nauticus 59.4627594627595 819.0 predicted 1 1
HK453387 Marinobacter nauticus 60.5898123324397 1119.0 predicted 1 1
HK453614 Marinobacter nauticus 54.1376643464811 1293.0 predicted 1 1
HK462665 Marinobacter nauticus 56.2256809338521 1542.0 predicted 1 1
HK462669 Marinobacter nauticus 57.30110775428 1986.0 predicted 1 1
HK462674 Marinobacter nauticus 61.4035087719298 1368.0 predicted 1 1
HK462677 Marinobacter nauticus 59.4385964912281 1425.0 predicted 1 1
HK658952 Marinobacter nauticus 56.2905317769131 1542.0 predicted 1 1
HK658957 Marinobacter nauticus 49.1569390402075 1542.0 predicted 1 1
HL192203 Marinobacter nauticus 58.9310829817159 1422.0 predicted 1 1
HL192204 Marinobacter nauticus 61.5497076023392 1368.0 predicted 1 1
HL268637 Marinobacter nauticus 56.3352826510721 1539.0 predicted 1 1
HL835702 Marinobacter nauticus 53.3142584644731 2097.0 predicted 1 1
HL836142 Marinobacter nauticus 55.0925925925926 648.0 predicted 1 1
HL836243 Marinobacter nauticus 59.5628415300546 732.0 predicted 1 1
HL836651 Marinobacter nauticus 60.8058608058608 546.0 predicted 1 1
HL836969 Marinobacter nauticus 55.026455026455 1134.0 predicted 1 1
HL837640 Marinobacter nauticus 58.6008230452675 1215.0 predicted 1 1
HL838099 Marinobacter nauticus 59.5959595959596 297.0 predicted 1 1
HL838474 Marinobacter nauticus 51.9884309472162 1383.0 predicted 1 1
HL838914 Marinobacter nauticus 59.6244131455399 639.0 predicted 1 1
HL840412 Marinobacter nauticus 58.2375478927203 522.0 predicted 1 1
HL943622 Marinobacter nauticus 61.7283950617284 567.0 predicted 1 1
HZ413142 Marinobacter nauticus 58.7136929460581 1446.0 predicted 1 1
HZ531081 Marinobacter nauticus 58.5091420534458 1422.0 predicted 1 1
HZ531082 Marinobacter nauticus 58.5091420534458 1422.0 predicted 1 1
HZ531084 Marinobacter nauticus 58.5794655414909 1422.0 predicted 1 1
HZ531085 Marinobacter nauticus 58.5794655414909 1422.0 predicted 1 1
HZ531086 Marinobacter nauticus 59.1420534458509 1422.0 predicted 1 1
HZ531087 Marinobacter nauticus 59.2123769338959 1422.0 predicted 1 1
HZ531088 Marinobacter nauticus 59.563994374121 1422.0 predicted 1 1
HZ531089 Marinobacter nauticus 59.2123769338959 1422.0 predicted 1 1
HZ531090 Marinobacter nauticus 59.1420534458509 1422.0 predicted 1 1
HZ531091 Marinobacter nauticus 59.2827004219409 1422.0 predicted 1 1
HZ531092 Marinobacter nauticus 59.0717299578059 1422.0 predicted 1 1
JA765695 Marinobacter nauticus 45.7805907172996 1422.0 predicted 1 1
KH715436 Marinobacter nauticus 46.693657219973 741.0 predicted 1 1
LG095075 Marinobacter nauticus 58.7904360056259 1422.0 predicted 1 1
LQ648789 Marinobacter nauticus 59.727626459144 1542.0 predicted 1 1
LY489876 Marinobacter nauticus 64.8382559774965 1422.0 predicted 1 1
MI099348 Marinobacter nauticus 39.9295065458207 1986.0 predicted 1 1
MI460573 Marinobacter nauticus 57.30110775428 1986.0 predicted 1 1
MO763209 Marinobacter nauticus 61.5497076023392 1368.0 predicted 1 1
MP729500 Marinobacter nauticus 59.3773728170084 1317.0 predicted 1 1
MP729509 Marinobacter nauticus 61.5111111111111 1125.0 predicted 1 1
MS916786 Marinobacter nauticus 64.7058823529412 561.0 predicted 1 1
MV660113 Marinobacter nauticus 56.3093243997767 3582.0 predicted 1 1
MV660719 Marinobacter nauticus 57.0123162495034 2517.0 predicted 1 1
MV661288 Marinobacter nauticus 51.7626827171109 3489.0 predicted 1 1
MV661934 Marinobacter nauticus 55.3129548762737 2061.0 predicted 1 1
MV662354 Marinobacter nauticus 52.0325203252033 615.0 predicted 1 1
MX512760 Marinobacter nauticus 62.5570776255708 876.0 predicted 1 1
MY054874 Marinobacter nauticus 67.704280155642 1542.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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