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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

29 rows where Species_name = "Marinobacter salinexigens"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
GC008519 Marinobacter salinexigens 53.2786885245902 244.0 predicted 1 1
GC008657 Marinobacter salinexigens 52.0361990950226 221.0 predicted 1 1
GP005767 Marinobacter salinexigens 61.7948717948718 390.0 predicted 1 1
GP099960 Marinobacter salinexigens 66.2538699690403 323.0 predicted 1 1
GP100063 Marinobacter salinexigens 67.7033492822967 418.0 predicted 1 1
GP104234 Marinobacter salinexigens 60.0 275.0 predicted 1 1
GP107012 Marinobacter salinexigens 64.021164021164 567.0 predicted 1 1
GP122851 Marinobacter salinexigens 66.3129973474801 377.0 predicted 1 1
GP133231 Marinobacter salinexigens 67.7316293929712 313.0 predicted 1 1
GP135988 Marinobacter salinexigens 76.3076923076923 325.0 predicted 1 1
GP136118 Marinobacter salinexigens 61.4130434782609 368.0 predicted 1 1
GP136926 Marinobacter salinexigens 61.4130434782609 368.0 predicted 1 1
GP141974 Marinobacter salinexigens 67.2371638141809 409.0 predicted 1 1
GP151558 Marinobacter salinexigens 66.3956639566396 369.0 predicted 1 1
GP152767 Marinobacter salinexigens 63.9846743295019 261.0 predicted 1 1
GP152962 Marinobacter salinexigens 66.815144766147 449.0 predicted 1 1
GP153453 Marinobacter salinexigens 66.6666666666667 405.0 predicted 1 1
GP153615 Marinobacter salinexigens 66.6666666666667 327.0 predicted 1 1
GP153946 Marinobacter salinexigens 61.7424242424242 264.0 predicted 1 1
GP154621 Marinobacter salinexigens 61.2745098039216 204.0 predicted 1 1
GP156922 Marinobacter salinexigens 48.1132075471698 318.0 predicted 1 1
GP162428 Marinobacter salinexigens 67.1348314606742 356.0 predicted 1 1
GP162690 Marinobacter salinexigens 66.7415730337079 445.0 predicted 1 1
GV088919 Marinobacter salinexigens 61.0526315789474 285.0 predicted 1 1
GV088934 Marinobacter salinexigens 66.2020905923345 287.0 predicted 1 1
HK409148 Marinobacter salinexigens 65.6652360515021 233.0 predicted 1 1
HK409646 Marinobacter salinexigens 68.3006535947712 306.0 predicted 1 1
HL275153 Marinobacter salinexigens 47.9674796747967 246.0 predicted 1 1
HL705293 Marinobacter salinexigens 44.8863636363636 176.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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