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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

30 rows where Species_name = "Marinobacter sp. b9-2"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
GM864432 Marinobacter sp. b9-2 51.0703363914373 654.0 predicted 1 1
GY110827 Marinobacter sp. b9-2 61.1940298507463 603.0 predicted 1 1
GZ314407 Marinobacter sp. b9-2 51.5290519877676 654.0 predicted 1 1
HI664950 Marinobacter sp. b9-2 52.6427061310782 1419.0 predicted 1 1
HI682449 Marinobacter sp. b9-2 47.5160256410256 1248.0 predicted 1 1
HI693473 Marinobacter sp. b9-2 42.6767676767677 792.0 predicted 1 1
HJ453548 Marinobacter sp. b9-2 51.6556291390729 151.0 predicted 1 1
HJ453560 Marinobacter sp. b9-2 48.7012987012987 154.0 predicted 1 1
HK012458 Marinobacter sp. b9-2 52.8685548293391 1377.0 predicted 1 1
HK012459 Marinobacter sp. b9-2 47.7564102564103 1248.0 predicted 1 1
HK012460 Marinobacter sp. b9-2 51.8348623853211 654.0 predicted 1 1
HK012462 Marinobacter sp. b9-2 49.7991967871486 249.0 predicted 1 1
HK012463 Marinobacter sp. b9-2 51.7426273458445 1119.0 predicted 1 1
HK016217 Marinobacter sp. b9-2 49.6212121212121 528.0 predicted 1 1
HK016218 Marinobacter sp. b9-2 50.5208333333333 576.0 predicted 1 1
HK016219 Marinobacter sp. b9-2 45.1851851851852 270.0 predicted 1 1
HK669164 Marinobacter sp. b9-2 52.5054466230937 1377.0 predicted 1 1
HK717923 Marinobacter sp. b9-2 42.8030303030303 792.0 predicted 1 1
HL066913 Marinobacter sp. b9-2 42.9657794676806 789.0 predicted 1 1
HL934983 Marinobacter sp. b9-2 64.9260226283725 1149.0 predicted 1 1
KH356152 Marinobacter sp. b9-2 51.6666666666667 180.0 predicted 1 1
LQ895487 Marinobacter sp. b9-2 64.8484848484848 165.0 predicted 1 1
LQ895502 Marinobacter sp. b9-2 65.3179190751445 173.0 predicted 1 1
LX063794 Marinobacter sp. b9-2 51.9213583556747 1119.0 predicted 1 1
LY674431 Marinobacter sp. b9-2 50.4587155963303 654.0 predicted 1 1
MI425260 Marinobacter sp. b9-2 52.4328249818446 1377.0 predicted 1 1
MM160158 Marinobacter sp. b9-2 43.2835820895522 201.0 predicted 1 1
MM160162 Marinobacter sp. b9-2 43.7810945273632 201.0 predicted 1 1
MP233418 Marinobacter sp. b9-2 54.4204322200393 509.0 predicted 1 1
MY503949 Marinobacter sp. b9-2 42.9042904290429 303.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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