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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

51 rows where Species_name = "Marinobacter sp. elb17"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
GM961918 Marinobacter sp. elb17 58.2962962962963 1350.0 observed 1 1
GM962289 Marinobacter sp. elb17 52.4613220815752 711.0 observed 1 1
GM962785 Marinobacter sp. elb17 57.1739130434783 1380.0 observed 1 1
GM963264 Marinobacter sp. elb17 51.7857142857143 1344.0 observed 1 1
GN079432 Marinobacter sp. elb17 52.4613220815752 711.0 observed 1 0
GN102181 Marinobacter sp. elb17 58.4722222222222 1440.0 observed 1 1
GN102183 Marinobacter sp. elb17 54.4802867383513 1395.0 observed 1 1
GN105219 Marinobacter sp. elb17 48.819641170916 1059.0 observed 1 1
GN106529 Marinobacter sp. elb17 54.8802946593002 543.0 observed 1 1
GN108778 Marinobacter sp. elb17 58.9430894308943 492.0 observed 1 1
GN109249 Marinobacter sp. elb17 55.674709562109 1119.0 observed 1 1
GN109904 Marinobacter sp. elb17 53.3011272141707 621.0 observed 1 1
GN120441 Marinobacter sp. elb17 55.5555555555556 270.0 observed 1 1
GN121005 Marinobacter sp. elb17 54.5253863134658 1812.0 observed 1 1
GN122473 Marinobacter sp. elb17 56.2706270627063 1212.0 observed 1 1
GN123538 Marinobacter sp. elb17 53.3844189016603 783.0 observed 1 1
GN123540 Marinobacter sp. elb17 53.2567049808429 783.0 observed 1 1
GN124033 Marinobacter sp. elb17 52.9461279461279 1188.0 observed 1 1
GN124035 Marinobacter sp. elb17 60.5527638190955 1194.0 observed 1 1
GN124556 Marinobacter sp. elb17 59.8540145985401 411.0 observed 1 1
GN125198 Marinobacter sp. elb17 55.9447983014862 942.0 observed 1 1
GN127306 Marinobacter sp. elb17 60.0896860986547 2007.0 observed 1 1
GN127909 Marinobacter sp. elb17 55.5090655509066 717.0 observed 1 1
GN128176 Marinobacter sp. elb17 59.1194968553459 795.0 observed 1 1
GN129671 Marinobacter sp. elb17 56.2706270627063 1212.0 observed 1 0
HB437471 Marinobacter sp. elb17 53.5897435897436 390.0 observed 1 1
HC495759 Marinobacter sp. elb17 57.158836689038 894.0 observed 1 1
HC496482 Marinobacter sp. elb17 55.1219512195122 1230.0 observed 1 1
HC497227 Marinobacter sp. elb17 54.1284403669725 654.0 observed 1 1
HC498007 Marinobacter sp. elb17 56.2962962962963 675.0 observed 1 1
HC499090 Marinobacter sp. elb17 57.158836689038 894.0 observed 1 0
HC505048 Marinobacter sp. elb17 58.5897435897436 2340.0 observed 1 1
HC505366 Marinobacter sp. elb17 54.4395924308588 687.0 observed 1 1
HC505608 Marinobacter sp. elb17 53.1362007168459 1116.0 observed 1 1
HC506382 Marinobacter sp. elb17 53.3333333333333 510.0 observed 1 1
HC506384 Marinobacter sp. elb17 53.3661740558292 609.0 observed 1 1
HC506581 Marinobacter sp. elb17 58.7081891580161 867.0 observed 1 1
HC507184 Marinobacter sp. elb17 53.8617886178862 1476.0 observed 1 1
HC743038 Marinobacter sp. elb17 50.2347417840376 213.0 observed 1 1
HC743093 Marinobacter sp. elb17 56.036036036036 555.0 observed 1 1
HC743370 Marinobacter sp. elb17 56.9230769230769 390.0 observed 1 1
HC743911 Marinobacter sp. elb17 55.6776556776557 1092.0 observed 1 1
HC744346 Marinobacter sp. elb17 51.0791366906475 417.0 observed 1 1
HC744608 Marinobacter sp. elb17 57.917760279965 1143.0 observed 1 1
HC745842 Marinobacter sp. elb17 55.7407407407407 1080.0 observed 1 1
HC748282 Marinobacter sp. elb17 53.1362007168459 1116.0 observed 1 0
HC748810 Marinobacter sp. elb17 57.3660714285714 1344.0 observed 1 1
HC749503 Marinobacter sp. elb17 56.7610062893082 1272.0 observed 1 1
HC749505 Marinobacter sp. elb17 57.0154095701541 1233.0 observed 1 1
HC749507 Marinobacter sp. elb17 59.0657165479018 1263.0 observed 1 1
HC750787 Marinobacter sp. elb17 56.4380264741276 831.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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