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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

113 rows where Species_name = "Metridia pacifica"

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Suggested facets: Sequence_length

Is_protein_coding_sequence 2

  • 1 104
  • 0 9

Is_annotated 2

  • 0 108
  • 1 5

Species_name 1

  • Metridia pacifica · 113 ✖

Sequence_status 1

  • observed 113
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DD367131 Metridia pacifica 44.7077409162717 633.0 observed 1 1
DD367132 Metridia pacifica 44.9122807017544 570.0 observed 1 1
DD367133 Metridia pacifica 40.1384083044983 867.0 observed 0 0
DD367134 Metridia pacifica 39.8406374501992 753.0 observed 0 0
DD367135 Metridia pacifica 44.5497630331754 633.0 observed 1 1
DD367136 Metridia pacifica 44.7077409162717 633.0 observed 1 1
HW429380 Metridia pacifica 31.0405643738977 567.0 observed 1 0
HW429381 Metridia pacifica 30.8641975308642 567.0 observed 1 0
HW429382 Metridia pacifica 30.8641975308642 567.0 observed 1 0
HW429384 Metridia pacifica 28.8888888888889 630.0 observed 1 0
HW429385 Metridia pacifica 28.7301587301587 630.0 observed 1 0
HW429386 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429401 Metridia pacifica 30.9050772626932 453.0 observed 1 0
HW429402 Metridia pacifica 30.6843267108168 453.0 observed 1 0
HW429403 Metridia pacifica 31.1258278145695 453.0 observed 1 0
HW429405 Metridia pacifica 30.1801801801802 444.0 observed 1 0
HW429417 Metridia pacifica 35.2941176470588 51.0 observed 0 0
HW429418 Metridia pacifica 25.9259259259259 54.0 observed 0 0
HW429419 Metridia pacifica 24.0740740740741 54.0 observed 0 0
HW429420 Metridia pacifica 27.7777777777778 54.0 observed 0 0
HW429428 Metridia pacifica 28.5714285714286 63.0 observed 0 0
HW429429 Metridia pacifica 26.984126984127 63.0 observed 0 0
HW429431 Metridia pacifica 25.7575757575758 132.0 observed 0 0
HW429441 Metridia pacifica 31.1258278145695 453.0 observed 1 0
HW429442 Metridia pacifica 30.9050772626932 453.0 observed 1 0
HW429443 Metridia pacifica 31.3465783664459 453.0 observed 1 0
HW429445 Metridia pacifica 30.4054054054054 444.0 observed 1 0
HW429460 Metridia pacifica 31.3932980599647 567.0 observed 1 0
HW429461 Metridia pacifica 31.2169312169312 567.0 observed 1 0
HW429462 Metridia pacifica 31.5696649029982 567.0 observed 1 0
HW429464 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429465 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429466 Metridia pacifica 29.3650793650794 630.0 observed 1 0
HW429482 Metridia pacifica 31.5696649029982 567.0 observed 1 0
HW429483 Metridia pacifica 31.3932980599647 567.0 observed 1 0
HW429484 Metridia pacifica 31.7460317460317 567.0 observed 1 0
HW429486 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429487 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429488 Metridia pacifica 29.3650793650794 630.0 observed 1 0
HW429504 Metridia pacifica 30.8641975308642 567.0 observed 1 0
HW429505 Metridia pacifica 30.8641975308642 567.0 observed 1 0
HW429506 Metridia pacifica 31.2169312169312 567.0 observed 1 0
HW429508 Metridia pacifica 28.8888888888889 630.0 observed 1 0
HW429509 Metridia pacifica 28.7301587301587 630.0 observed 1 0
HW429510 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429526 Metridia pacifica 31.7460317460317 567.0 observed 1 0
HW429527 Metridia pacifica 31.5696649029982 567.0 observed 1 0
HW429528 Metridia pacifica 31.9223985890653 567.0 observed 1 0
HW429530 Metridia pacifica 29.3650793650794 630.0 observed 1 0
HW429531 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429532 Metridia pacifica 29.5238095238095 630.0 observed 1 0
HW429548 Metridia pacifica 31.0405643738977 567.0 observed 1 0
HW429549 Metridia pacifica 31.0405643738977 567.0 observed 1 0
HW429550 Metridia pacifica 31.3932980599647 567.0 observed 1 0
HW429552 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429553 Metridia pacifica 28.8888888888889 630.0 observed 1 0
HW429554 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429570 Metridia pacifica 31.2169312169312 567.0 observed 1 0
HW429571 Metridia pacifica 31.2169312169312 567.0 observed 1 0
HW429572 Metridia pacifica 31.5696649029982 567.0 observed 1 0
HW429574 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429575 Metridia pacifica 28.8888888888889 630.0 observed 1 0
HW429576 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429592 Metridia pacifica 31.3932980599647 567.0 observed 1 0
HW429593 Metridia pacifica 31.3932980599647 567.0 observed 1 0
HW429594 Metridia pacifica 31.7460317460317 567.0 observed 1 0
HW429596 Metridia pacifica 29.2063492063492 630.0 observed 1 0
HW429597 Metridia pacifica 29.047619047619 630.0 observed 1 0
HW429598 Metridia pacifica 29.3650793650794 630.0 observed 1 0
HW429614 Metridia pacifica 31.3465783664459 453.0 observed 1 0
HW429615 Metridia pacifica 31.1258278145695 453.0 observed 1 0
HW429616 Metridia pacifica 31.5673289183223 453.0 observed 1 0
HW429618 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429619 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429620 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429636 Metridia pacifica 31.5673289183223 453.0 observed 1 0
HW429637 Metridia pacifica 31.3465783664459 453.0 observed 1 0
HW429638 Metridia pacifica 31.7880794701987 453.0 observed 1 0
HW429640 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429641 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429642 Metridia pacifica 30.6306306306306 444.0 observed 1 0
HW429658 Metridia pacifica 30.6843267108168 453.0 observed 1 0
HW429659 Metridia pacifica 30.6843267108168 453.0 observed 1 0
HW429660 Metridia pacifica 31.1258278145695 453.0 observed 1 0
HW429662 Metridia pacifica 30.1801801801802 444.0 observed 1 0
HW429663 Metridia pacifica 30.1801801801802 444.0 observed 1 0
HW429664 Metridia pacifica 30.1801801801802 444.0 observed 1 0
HW429680 Metridia pacifica 31.7880794701987 453.0 observed 1 0
HW429681 Metridia pacifica 31.5673289183223 453.0 observed 1 0
HW429682 Metridia pacifica 32.0088300220751 453.0 observed 1 0
HW429684 Metridia pacifica 30.8558558558559 444.0 observed 1 0
HW429685 Metridia pacifica 30.8558558558559 444.0 observed 1 0
HW429686 Metridia pacifica 30.8558558558559 444.0 observed 1 0
HW429702 Metridia pacifica 30.9050772626932 453.0 observed 1 0
HW429703 Metridia pacifica 30.9050772626932 453.0 observed 1 0
HW429704 Metridia pacifica 31.3465783664459 453.0 observed 1 0
HW429706 Metridia pacifica 30.4054054054054 444.0 observed 1 0
HW429707 Metridia pacifica 30.4054054054054 444.0 observed 1 0
HW429708 Metridia pacifica 30.4054054054054 444.0 observed 1 0
HW429724 Metridia pacifica 31.1258278145695 453.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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