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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

24 rows where Species_name = "Montipora"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HB981030 Montipora 48.5380116959064 684.0 observed 1 0
HB981038 Montipora 45.4935622317596 699.0 observed 1 1
HC467903 Montipora 45.7957957957958 666.0 observed 1 0
HC467905 Montipora 45.8893871449925 669.0 observed 1 0
HC467907 Montipora 45.7399103139013 669.0 observed 1 0
HC467909 Montipora 45.7399103139013 669.0 observed 1 0
HC467911 Montipora 47.1895424836601 765.0 observed 1 0
HC467913 Montipora 47.1895424836601 765.0 observed 1 0
HC467915 Montipora 63.2753235162874 2241.0 observed 1 0
HC467917 Montipora 54.2406311637081 1521.0 observed 1 0
HC467919 Montipora 54.2406311637081 1521.0 observed 1 0
HC467921 Montipora 54.9878345498783 1233.0 observed 1 0
HC467923 Montipora 47.6851851851852 864.0 observed 1 0
JA318821 Montipora 45.7957957957958 666.0 observed 1 1
JA318823 Montipora 45.8893871449925 669.0 observed 1 1
JA318825 Montipora 45.7399103139013 669.0 observed 1 1
JA318827 Montipora 45.7399103139013 669.0 observed 1 1
JA318829 Montipora 47.1895424836601 765.0 observed 1 0
JA318831 Montipora 47.1895424836601 765.0 observed 1 0
JA318833 Montipora 63.2753235162874 2241.0 observed 1 0
JA318835 Montipora 54.2406311637081 1521.0 observed 1 0
JA318837 Montipora 54.2406311637081 1521.0 observed 1 0
JA318839 Montipora 54.9878345498783 1233.0 observed 1 0
JA318841 Montipora 47.6851851851852 864.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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