home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

26 rows where Species_name = "Nitrococcus mobilis"

✎ View and edit SQL

This data as json, CSV (advanced)

These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated

Species_name 1

  • Nitrococcus mobilis · 26 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI345474 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
GN042344 Nitrococcus mobilis 61.5023474178404 639.0 observed 1 1
HC508071 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
HC508983 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
HC509682 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
HC510126 Nitrococcus mobilis 59.1269841269841 1260.0 observed 1 1
HV700176 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 1
HW268065 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
JC738436 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
LF709863 Nitrococcus mobilis 60.3907637655417 1689.0 observed 1 0
LP125047 Nitrococcus mobilis 60.252281266774 3726.0 observed 1 1
LP125068 Nitrococcus mobilis 66.5849005178523 3669.0 observed 1 1
LP125098 Nitrococcus mobilis 62.3397435897436 624.0 observed 1 1
LP125099 Nitrococcus mobilis 68.0944963655244 3852.0 observed 1 1
LP126172 Nitrococcus mobilis 61.7042606516291 1995.0 observed 1 1
LP126193 Nitrococcus mobilis 66.5895953757225 2595.0 observed 1 1
LP127246 Nitrococcus mobilis 66.1975717439294 3624.0 observed 1 1
LP127830 Nitrococcus mobilis 59.2552422270427 2766.0 observed 1 1
LP128077 Nitrococcus mobilis 62.8776978417266 2085.0 observed 1 1
LP129423 Nitrococcus mobilis 59.7510373443983 723.0 observed 1 1
LP130054 Nitrococcus mobilis 64.7553516819572 1308.0 observed 1 1
LP130574 Nitrococcus mobilis 62.3397435897436 624.0 observed 1 0
LP130575 Nitrococcus mobilis 68.0944963655244 3852.0 observed 1 0
LP130673 Nitrococcus mobilis 62.0262132483174 2823.0 observed 1 1
MP882246 Nitrococcus mobilis 56.921373200443 903.0 observed 1 1
MS987566 Nitrococcus mobilis 66.5274878218511 2874.0 observed 0 0

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 3519.337ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT