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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

581 rows where Species_name = "Oceanobacillus iheyensis"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DD309349 Oceanobacillus iheyensis 37.6744186046512 215.0 observed 1 0
DD309350 Oceanobacillus iheyensis 33.6448598130841 214.0 observed 0 0
DD309391 Oceanobacillus iheyensis 40.2439024390244 82.0 observed 0 0
DD309392 Oceanobacillus iheyensis 39.0243902439024 82.0 observed 0 0
DD309393 Oceanobacillus iheyensis 39.0243902439024 82.0 observed 0 0
DD309394 Oceanobacillus iheyensis 41.4634146341463 82.0 observed 0 0
DD309435 Oceanobacillus iheyensis 27.3662551440329 486.0 observed 0 0
DD309437 Oceanobacillus iheyensis 23.2510288065844 486.0 observed 0 0
DD309438 Oceanobacillus iheyensis 24.6913580246914 486.0 observed 0 0
DD309439 Oceanobacillus iheyensis 26.1316872427984 486.0 observed 0 0
DD309440 Oceanobacillus iheyensis 25.5144032921811 486.0 observed 0 0
DD309441 Oceanobacillus iheyensis 22.6337448559671 486.0 observed 0 0
DD309442 Oceanobacillus iheyensis 27.3662551440329 486.0 observed 0 0
DD309443 Oceanobacillus iheyensis 25.3086419753086 486.0 observed 0 0
DD309444 Oceanobacillus iheyensis 27.7777777777778 486.0 observed 0 0
DD309445 Oceanobacillus iheyensis 27.3662551440329 486.0 observed 0 0
DD309446 Oceanobacillus iheyensis 25.7201646090535 486.0 observed 0 0
DD309447 Oceanobacillus iheyensis 27.5720164609053 486.0 observed 0 0
DD309448 Oceanobacillus iheyensis 31.6872427983539 486.0 observed 0 0
DD309638 Oceanobacillus iheyensis 40.9523809523809 105.0 observed 0 0
DD309640 Oceanobacillus iheyensis 39.0476190476191 105.0 observed 0 0
DD309641 Oceanobacillus iheyensis 37.1428571428571 105.0 observed 0 0
DD309661 Oceanobacillus iheyensis 36.8421052631579 228.0 observed 0 0
DD309662 Oceanobacillus iheyensis 31.5789473684211 228.0 observed 0 0
DD421707 Oceanobacillus iheyensis 39.7368421052632 1140.0 observed 1 1
DI345390 Oceanobacillus iheyensis 40.6287069988138 1686.0 observed 1 0
DL136825 Oceanobacillus iheyensis 39.7368421052632 1140.0 observed 1 0
DL137816 Oceanobacillus iheyensis 39.7368421052632 1140.0 observed 1 0
DL137862 Oceanobacillus iheyensis 39.7368421052632 1140.0 observed 1 0
DL183254 Oceanobacillus iheyensis 39.7368421052632 1140.0 observed 1 0
FB335480 Oceanobacillus iheyensis 35.1778656126482 759.0 observed 1 1
FB718716 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 1
FB719090 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
FB719348 Oceanobacillus iheyensis 37.490882567469 1371.0 observed 1 1
FB784079 Oceanobacillus iheyensis 37.6614987080103 1548.0 observed 1 1
FB791629 Oceanobacillus iheyensis 37.6614987080103 1548.0 observed 1 0
FB808185 Oceanobacillus iheyensis 36.0623781676413 1539.0 observed 1 1
GM833182 Oceanobacillus iheyensis 36.6366366366366 666.0 observed 1 1
GM957800 Oceanobacillus iheyensis 34.9372384937238 1434.0 observed 1 1
GM959482 Oceanobacillus iheyensis 36.4357864357864 1386.0 observed 1 1
GM961649 Oceanobacillus iheyensis 39.4799054373522 423.0 observed 1 1
GN095520 Oceanobacillus iheyensis 37.3522458628842 423.0 observed 1 1
GN101137 Oceanobacillus iheyensis 37.9607843137255 1275.0 observed 1 1
GN102431 Oceanobacillus iheyensis 41.4336917562724 1395.0 observed 1 1
GN103206 Oceanobacillus iheyensis 38.3606557377049 915.0 observed 1 1
GN104646 Oceanobacillus iheyensis 37.2977346278317 1236.0 observed 1 1
GN106679 Oceanobacillus iheyensis 35.4775828460039 513.0 observed 1 1
GN122701 Oceanobacillus iheyensis 37.3205741626794 1254.0 observed 1 1
GN128418 Oceanobacillus iheyensis 43.6654366543666 813.0 observed 1 1
GN129893 Oceanobacillus iheyensis 37.3205741626794 1254.0 observed 1 0
HB437925 Oceanobacillus iheyensis 41.5384615384615 390.0 observed 1 1
HB438581 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 1
HB444115 Oceanobacillus iheyensis 34.1438703140831 987.0 observed 1 1
HB444117 Oceanobacillus iheyensis 35.9953703703704 864.0 observed 1 1
HB461918 Oceanobacillus iheyensis 41.7821782178218 1515.0 observed 1 1
HB462213 Oceanobacillus iheyensis 37.4911909795631 1419.0 observed 1 1
HB462334 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 0
HB654138 Oceanobacillus iheyensis 37.6614987080103 1548.0 observed 1 0
HB661688 Oceanobacillus iheyensis 37.6614987080103 1548.0 observed 1 0
HB678244 Oceanobacillus iheyensis 36.0623781676413 1539.0 observed 1 0
HB856581 Oceanobacillus iheyensis 36.6366366366366 666.0 observed 1 0
HB867390 Oceanobacillus iheyensis 41.7821782178218 1515.0 observed 1 0
HB867685 Oceanobacillus iheyensis 37.4911909795631 1419.0 observed 1 0
HB867806 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 0
HB868185 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 1
HB868832 Oceanobacillus iheyensis 33.2304526748971 972.0 observed 1 1
HB869224 Oceanobacillus iheyensis 32.687338501292 774.0 observed 1 1
HB869226 Oceanobacillus iheyensis 34.9397590361446 747.0 observed 1 1
HB869445 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 0
HB869629 Oceanobacillus iheyensis 32.687338501292 774.0 observed 1 0
HB869631 Oceanobacillus iheyensis 34.9397590361446 747.0 observed 1 0
HB869893 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HB870289 Oceanobacillus iheyensis 38.6015325670498 1044.0 observed 1 1
HB870481 Oceanobacillus iheyensis 37.6391982182628 1347.0 observed 1 1
HB870483 Oceanobacillus iheyensis 35.0954478707783 1362.0 observed 1 1
HB871075 Oceanobacillus iheyensis 39.792899408284 2028.0 observed 1 1
HB871325 Oceanobacillus iheyensis 37.490882567469 1371.0 observed 1 0
HB871861 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 0
HB872273 Oceanobacillus iheyensis 38.0116959064327 1368.0 observed 1 1
HB872275 Oceanobacillus iheyensis 35.9433258762118 1341.0 observed 1 1
HB872277 Oceanobacillus iheyensis 36.8176538908246 3444.0 observed 1 1
HB872861 Oceanobacillus iheyensis 38.6015325670498 1044.0 observed 1 0
HB873533 Oceanobacillus iheyensis 38.0116959064327 1368.0 observed 1 0
HB873535 Oceanobacillus iheyensis 35.9433258762118 1341.0 observed 1 0
HB873537 Oceanobacillus iheyensis 36.8176538908246 3444.0 observed 1 0
HB873985 Oceanobacillus iheyensis 38.6015325670498 1044.0 observed 1 0
HB874561 Oceanobacillus iheyensis 36.8421052631579 741.0 observed 1 1
HB874563 Oceanobacillus iheyensis 38.562091503268 765.0 observed 1 1
HB875404 Oceanobacillus iheyensis 38.0116959064327 1368.0 observed 1 0
HB875406 Oceanobacillus iheyensis 35.9433258762118 1341.0 observed 1 0
HB875408 Oceanobacillus iheyensis 36.8176538908246 3444.0 observed 1 0
HB875838 Oceanobacillus iheyensis 39.031339031339 702.0 observed 1 1
HB875840 Oceanobacillus iheyensis 32.6149425287356 696.0 observed 1 1
HB875842 Oceanobacillus iheyensis 35.4253835425384 717.0 observed 1 1
HB876236 Oceanobacillus iheyensis 38.6015325670498 1044.0 observed 1 0
HB876882 Oceanobacillus iheyensis 32.687338501292 774.0 observed 1 0
HB876884 Oceanobacillus iheyensis 34.9397590361446 747.0 observed 1 0
HB876992 Oceanobacillus iheyensis 37.1601208459214 993.0 observed 1 1
HB877406 Oceanobacillus iheyensis 33.8403041825095 789.0 observed 1 1
HB877968 Oceanobacillus iheyensis 33.8820301783265 729.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 5366.861ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT