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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

581 rows where Species_name = "Oceanobacillus iheyensis"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HB928937 Oceanobacillus iheyensis 40.1515151515151 924.0 observed 1 0
HB928939 Oceanobacillus iheyensis 41.5318230852211 927.0 observed 1 0
HB931000 Oceanobacillus iheyensis 38.1800197823937 2022.0 observed 1 0
HB931583 Oceanobacillus iheyensis 35.7456140350877 912.0 observed 1 0
HB932178 Oceanobacillus iheyensis 41.7808219178082 438.0 observed 1 0
HB934407 Oceanobacillus iheyensis 40.0527009222661 759.0 observed 1 1
HB934688 Oceanobacillus iheyensis 34.9593495934959 246.0 observed 1 1
HB937071 Oceanobacillus iheyensis 37.4584165003327 1503.0 observed 1 1
HB937581 Oceanobacillus iheyensis 33.8403041825095 789.0 observed 1 0
HB940052 Oceanobacillus iheyensis 39.1585760517799 927.0 observed 1 1
HB940104 Oceanobacillus iheyensis 36.7117117117117 888.0 observed 1 1
HB940492 Oceanobacillus iheyensis 37.1120107962213 1482.0 observed 1 0
HB944460 Oceanobacillus iheyensis 36.1386138613861 606.0 observed 1 0
HB945323 Oceanobacillus iheyensis 36.5591397849462 930.0 observed 1 0
HB945335 Oceanobacillus iheyensis 40.1515151515151 924.0 observed 1 0
HB945337 Oceanobacillus iheyensis 41.5318230852211 927.0 observed 1 0
HB946328 Oceanobacillus iheyensis 38.6067708333333 1536.0 observed 1 1
HB948634 Oceanobacillus iheyensis 37.3205741626794 1254.0 observed 1 0
HB948957 Oceanobacillus iheyensis 41.7808219178082 438.0 observed 1 0
HB950339 Oceanobacillus iheyensis 40.0527009222661 759.0 observed 1 0
HB950750 Oceanobacillus iheyensis 37.4584165003327 1503.0 observed 1 0
HB951500 Oceanobacillus iheyensis 37.1120107962213 1482.0 observed 1 0
HB953688 Oceanobacillus iheyensis 41.7808219178082 438.0 observed 1 0
HB955684 Oceanobacillus iheyensis 39.1585760517799 927.0 observed 1 0
HB955736 Oceanobacillus iheyensis 36.7117117117117 888.0 observed 1 0
HB956696 Oceanobacillus iheyensis 37.3205741626794 1254.0 observed 1 0
HB957019 Oceanobacillus iheyensis 41.7808219178082 438.0 observed 1 0
HB957500 Oceanobacillus iheyensis 37.1120107962213 1482.0 observed 1 0
HB958064 Oceanobacillus iheyensis 38.4940778341794 1182.0 observed 1 1
HB959102 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HB964142 Oceanobacillus iheyensis 40.0527009222661 759.0 observed 1 0
HB968583 Oceanobacillus iheyensis 43.6654366543666 813.0 observed 1 0
HB968802 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HB971186 Oceanobacillus iheyensis 36.2179487179487 624.0 observed 1 1
HB971733 Oceanobacillus iheyensis 32.8472222222222 1440.0 observed 1 1
HB972577 Oceanobacillus iheyensis 28.0 225.0 observed 1 1
HB975300 Oceanobacillus iheyensis 37.1751412429379 2655.0 observed 1 1
HC464110 Oceanobacillus iheyensis 35.9217171717172 1584.0 observed 1 1
HC497443 Oceanobacillus iheyensis 38.5802469135802 648.0 observed 1 1
HC498051 Oceanobacillus iheyensis 36.1481481481482 675.0 observed 1 1
HC498055 Oceanobacillus iheyensis 37.1851851851852 675.0 observed 1 1
HC507903 Oceanobacillus iheyensis 40.6287069988138 1686.0 observed 1 0
HC508815 Oceanobacillus iheyensis 40.6287069988138 1686.0 observed 1 0
HC509514 Oceanobacillus iheyensis 40.6287069988138 1686.0 observed 1 0
HC510046 Oceanobacillus iheyensis 37.9084967320261 1224.0 observed 1 1
HC743574 Oceanobacillus iheyensis 36.745406824147 381.0 observed 1 1
HC745271 Oceanobacillus iheyensis 36.1979166666667 384.0 observed 1 1
HC746080 Oceanobacillus iheyensis 38.5185185185185 945.0 observed 1 1
HC749060 Oceanobacillus iheyensis 39.7464578672632 1341.0 observed 1 1
HC890479 Oceanobacillus iheyensis 36.5979381443299 582.0 observed 1 1
HC890819 Oceanobacillus iheyensis 37.1601208459214 1986.0 observed 1 1
HC890821 Oceanobacillus iheyensis 39.1025641025641 1716.0 observed 1 1
HC891795 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HC892063 Oceanobacillus iheyensis 32.2463768115942 552.0 observed 1 1
HC892619 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC893011 Oceanobacillus iheyensis 38.0401234567901 1296.0 observed 1 1
HC893425 Oceanobacillus iheyensis 37.8820184790334 1407.0 observed 1 1
HC893735 Oceanobacillus iheyensis 33.6492890995261 633.0 observed 1 1
HC894127 Oceanobacillus iheyensis 38.4496124031008 1290.0 observed 1 1
HC894435 Oceanobacillus iheyensis 41.010101010101 1485.0 observed 1 1
HC894779 Oceanobacillus iheyensis 34.9372384937238 1434.0 observed 1 0
HC895011 Oceanobacillus iheyensis 36.5979381443299 582.0 observed 1 0
HC895351 Oceanobacillus iheyensis 37.1601208459214 1986.0 observed 1 0
HC895353 Oceanobacillus iheyensis 39.1025641025641 1716.0 observed 1 0
HC895895 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC896486 Oceanobacillus iheyensis 33.6492890995261 633.0 observed 1 0
HC896646 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HC896984 Oceanobacillus iheyensis 35.2941176470588 867.0 observed 1 1
HC896996 Oceanobacillus iheyensis 37.8082191780822 1095.0 observed 1 1
HC897422 Oceanobacillus iheyensis 37.5922771152754 1761.0 observed 1 1
HC897908 Oceanobacillus iheyensis 36.9971264367816 1392.0 observed 1 1
HC898388 Oceanobacillus iheyensis 36.5979381443299 582.0 observed 1 0
HC898818 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC899318 Oceanobacillus iheyensis 37.8820184790334 1407.0 observed 1 0
HC899624 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC900116 Oceanobacillus iheyensis 39.4771241830065 765.0 observed 1 1
HC900578 Oceanobacillus iheyensis 38.4940778341794 1182.0 observed 1 0
HC900812 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HC901318 Oceanobacillus iheyensis 37.5922771152754 1761.0 observed 1 0
HC901844 Oceanobacillus iheyensis 38.1258941344778 1398.0 observed 1 1
HC901846 Oceanobacillus iheyensis 39.1613361762615 1407.0 observed 1 1
HC902452 Oceanobacillus iheyensis 40.9638554216867 1494.0 observed 1 1
HC902460 Oceanobacillus iheyensis 36.5635738831615 1455.0 observed 1 1
HC902530 Oceanobacillus iheyensis 37.984496124031 1548.0 observed 1 1
HC902636 Oceanobacillus iheyensis 36.5979381443299 582.0 observed 1 0
HC903170 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC906823 Oceanobacillus iheyensis 37.3563218390805 696.0 observed 1 1
HC907693 Oceanobacillus iheyensis 34.4863731656184 954.0 observed 1 1
HC908042 Oceanobacillus iheyensis 34.9372384937238 1434.0 observed 1 0
HC908339 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC910686 Oceanobacillus iheyensis 33.6492890995261 633.0 observed 1 0
HC912092 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HC912444 Oceanobacillus iheyensis 34.8977135980746 831.0 observed 1 1
HC912768 Oceanobacillus iheyensis 32.2463768115942 552.0 observed 1 0
HC915275 Oceanobacillus iheyensis 36.9918699186992 1476.0 observed 1 0
HC924799 Oceanobacillus iheyensis 41.7821782178218 1515.0 observed 1 0
HC925094 Oceanobacillus iheyensis 37.4911909795631 1419.0 observed 1 0
HC925215 Oceanobacillus iheyensis 34.2704149933066 747.0 observed 1 0
HC925594 Oceanobacillus iheyensis 37.5616631430585 1419.0 observed 1 0
HC926241 Oceanobacillus iheyensis 33.2304526748971 972.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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