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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

387 rows where Species_name = "Oceanobacillus iheyensis hte831"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HB918742 Oceanobacillus iheyensis hte831 42.7083333333333 1056.0 observed 1 0
HB919122 Oceanobacillus iheyensis hte831 39.247311827957 1488.0 observed 1 0
HB920602 Oceanobacillus iheyensis hte831 39.0772128060264 1062.0 observed 1 1
HB920604 Oceanobacillus iheyensis hte831 37.7581120943953 1017.0 observed 1 0
HB922611 Oceanobacillus iheyensis hte831 38.8127853881279 876.0 observed 1 0
HB923452 Oceanobacillus iheyensis hte831 37.3713380839272 1263.0 observed 1 1
HB923454 Oceanobacillus iheyensis hte831 36.5190365190365 1287.0 observed 1 1
HB923456 Oceanobacillus iheyensis hte831 36.9266055045872 1308.0 observed 1 1
HB923458 Oceanobacillus iheyensis hte831 37.088122605364 1305.0 observed 1 1
HB923460 Oceanobacillus iheyensis hte831 36.5490196078431 1275.0 observed 1 1
HB923462 Oceanobacillus iheyensis hte831 40.6727828746177 1308.0 observed 1 1
HB924506 Oceanobacillus iheyensis hte831 36.4180478821363 2172.0 observed 1 0
HB924508 Oceanobacillus iheyensis hte831 39.5608351331893 2778.0 observed 1 0
HB924510 Oceanobacillus iheyensis hte831 36.7357001972387 2028.0 observed 1 0
HB926366 Oceanobacillus iheyensis hte831 39.247311827957 1488.0 observed 1 0
HB927059 Oceanobacillus iheyensis hte831 36.8217054263566 774.0 observed 1 0
HB927061 Oceanobacillus iheyensis hte831 35.1778656126482 759.0 observed 1 0
HB927214 Oceanobacillus iheyensis hte831 33.3333333333333 336.0 observed 1 0
HB927216 Oceanobacillus iheyensis hte831 34.2948717948718 312.0 observed 1 1
HB927386 Oceanobacillus iheyensis hte831 34.640522875817 306.0 observed 1 0
HB927388 Oceanobacillus iheyensis hte831 38.562091503268 306.0 observed 1 0
HB928196 Oceanobacillus iheyensis hte831 34.1991341991342 693.0 observed 1 1
HB929174 Oceanobacillus iheyensis hte831 38.562091503268 765.0 observed 1 0
HB929176 Oceanobacillus iheyensis hte831 36.8421052631579 741.0 observed 1 0
HB929680 Oceanobacillus iheyensis hte831 34.7953216374269 342.0 observed 1 1
HB930438 Oceanobacillus iheyensis hte831 38.6939571150098 1026.0 observed 1 0
HB931188 Oceanobacillus iheyensis hte831 36.9261477045908 1002.0 observed 1 0
HB931190 Oceanobacillus iheyensis hte831 38.4868421052632 912.0 observed 1 0
HB931192 Oceanobacillus iheyensis hte831 39.9019607843137 1020.0 observed 1 0
HB931716 Oceanobacillus iheyensis hte831 37.6255707762557 1095.0 observed 1 1
HB932415 Oceanobacillus iheyensis hte831 34.5161290322581 930.0 observed 1 1
HB932417 Oceanobacillus iheyensis hte831 35.4838709677419 1023.0 observed 1 1
HB933314 Oceanobacillus iheyensis hte831 36.604774535809 1131.0 observed 1 0
HB933316 Oceanobacillus iheyensis hte831 35.752688172043 1116.0 observed 1 0
HB936181 Oceanobacillus iheyensis hte831 32.1333333333333 750.0 observed 1 1
HB936376 Oceanobacillus iheyensis hte831 32.9943502824859 1770.0 observed 1 0
HB936378 Oceanobacillus iheyensis hte831 34.7055460263007 1749.0 observed 1 0
HB938346 Oceanobacillus iheyensis hte831 36.9261477045908 1002.0 observed 1 0
HB938348 Oceanobacillus iheyensis hte831 38.4868421052632 912.0 observed 1 0
HB938350 Oceanobacillus iheyensis hte831 39.9019607843137 1020.0 observed 1 0
HB940151 Oceanobacillus iheyensis hte831 36.3896029705798 3501.0 observed 1 0
HB940928 Oceanobacillus iheyensis hte831 37.0934959349593 984.0 observed 1 1
HB941310 Oceanobacillus iheyensis hte831 40.2020202020202 1485.0 observed 1 0
HB943226 Oceanobacillus iheyensis hte831 39.247311827957 1488.0 observed 1 0
HB944856 Oceanobacillus iheyensis hte831 37.206572769953 852.0 observed 1 1
HB945572 Oceanobacillus iheyensis hte831 38.562091503268 765.0 observed 1 0
HB945574 Oceanobacillus iheyensis hte831 36.8421052631579 741.0 observed 1 0
HB946464 Oceanobacillus iheyensis hte831 34.7953216374269 342.0 observed 1 0
HB947517 Oceanobacillus iheyensis hte831 38.6939571150098 1026.0 observed 1 0
HB948013 Oceanobacillus iheyensis hte831 36.9261477045908 1002.0 observed 1 0
HB948015 Oceanobacillus iheyensis hte831 38.4868421052632 912.0 observed 1 0
HB948017 Oceanobacillus iheyensis hte831 39.9019607843137 1020.0 observed 1 0
HB948248 Oceanobacillus iheyensis hte831 37.6255707762557 1095.0 observed 1 0
HB949517 Oceanobacillus iheyensis hte831 35.8467983243567 1671.0 observed 1 1
HB949519 Oceanobacillus iheyensis hte831 39.8954703832753 1722.0 observed 1 1
HB951917 Oceanobacillus iheyensis hte831 39.7694524495677 1041.0 observed 1 0
HB952902 Oceanobacillus iheyensis hte831 33.6907953529937 1119.0 observed 1 0
HB954476 Oceanobacillus iheyensis hte831 39.247311827957 1488.0 observed 1 0
HB954982 Oceanobacillus iheyensis hte831 36.8217054263566 774.0 observed 1 0
HB954984 Oceanobacillus iheyensis hte831 35.1778656126482 759.0 observed 1 0
HB955115 Oceanobacillus iheyensis hte831 34.640522875817 306.0 observed 1 0
HB955117 Oceanobacillus iheyensis hte831 38.562091503268 306.0 observed 1 0
HB955231 Oceanobacillus iheyensis hte831 33.6028751123091 1113.0 observed 1 1
HB956075 Oceanobacillus iheyensis hte831 36.9261477045908 1002.0 observed 1 0
HB956077 Oceanobacillus iheyensis hte831 38.4868421052632 912.0 observed 1 0
HB956079 Oceanobacillus iheyensis hte831 39.9019607843137 1020.0 observed 1 0
HB956310 Oceanobacillus iheyensis hte831 37.6255707762557 1095.0 observed 1 0
HB957568 Oceanobacillus iheyensis hte831 35.3928299008391 1311.0 observed 1 1
HB958503 Oceanobacillus iheyensis hte831 32.8252032520325 984.0 observed 1 1
HB958865 Oceanobacillus iheyensis hte831 36.8217054263566 774.0 observed 1 0
HB958867 Oceanobacillus iheyensis hte831 35.1778656126482 759.0 observed 1 0
HB959254 Oceanobacillus iheyensis hte831 38.562091503268 765.0 observed 1 0
HB959256 Oceanobacillus iheyensis hte831 36.8421052631579 741.0 observed 1 0
HB960396 Oceanobacillus iheyensis hte831 36.4180478821363 2172.0 observed 1 0
HB960398 Oceanobacillus iheyensis hte831 39.5608351331893 2778.0 observed 1 0
HB960400 Oceanobacillus iheyensis hte831 36.7357001972387 2028.0 observed 1 0
HB960967 Oceanobacillus iheyensis hte831 36.5209471766849 1098.0 observed 1 0
HB961855 Oceanobacillus iheyensis hte831 33.3333333333333 336.0 observed 1 0
HB961857 Oceanobacillus iheyensis hte831 34.2948717948718 312.0 observed 1 0
HB962017 Oceanobacillus iheyensis hte831 33.6028751123091 1113.0 observed 1 0
HB962623 Oceanobacillus iheyensis hte831 37.3713380839272 1263.0 observed 1 0
HB962625 Oceanobacillus iheyensis hte831 36.5190365190365 1287.0 observed 1 0
HB962627 Oceanobacillus iheyensis hte831 36.9266055045872 1308.0 observed 1 0
HB962629 Oceanobacillus iheyensis hte831 37.088122605364 1305.0 observed 1 0
HB962631 Oceanobacillus iheyensis hte831 36.5490196078431 1275.0 observed 1 0
HB962633 Oceanobacillus iheyensis hte831 40.6727828746177 1308.0 observed 1 0
HB963136 Oceanobacillus iheyensis hte831 34.5161290322581 930.0 observed 1 0
HB963138 Oceanobacillus iheyensis hte831 35.4838709677419 1023.0 observed 1 0
HB967038 Oceanobacillus iheyensis hte831 33.3333333333333 336.0 observed 1 0
HB967040 Oceanobacillus iheyensis hte831 34.2948717948718 312.0 observed 1 0
HB967210 Oceanobacillus iheyensis hte831 34.640522875817 306.0 observed 1 0
HB967212 Oceanobacillus iheyensis hte831 38.562091503268 306.0 observed 1 0
HB967342 Oceanobacillus iheyensis hte831 36.9261477045908 1002.0 observed 1 0
HB967344 Oceanobacillus iheyensis hte831 38.4868421052632 912.0 observed 1 0
HB967346 Oceanobacillus iheyensis hte831 39.9019607843137 1020.0 observed 1 0
HB969178 Oceanobacillus iheyensis hte831 40.8163265306122 1176.0 observed 1 1
HB971891 Oceanobacillus iheyensis hte831 37.3376623376623 924.0 observed 1 1
HB971893 Oceanobacillus iheyensis hte831 41.6142557651992 954.0 observed 1 1
HB972770 Oceanobacillus iheyensis hte831 35.9084406294707 1398.0 observed 1 1
HB973707 Oceanobacillus iheyensis hte831 33.4656084656085 756.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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