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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

110 rows where Species_name = "Ostreococcus sp. 'lucimarinus'"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI345602 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
FB749639 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
FB983338 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
FB983340 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
FB983342 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
FB983344 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
FB983346 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
FB983348 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
FB983350 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
FB983352 Ostreococcus sp. 'lucimarinus' 45.3703703703704 864.0 observed 1 1
FW343830 Ostreococcus sp. 'lucimarinus' 50.5903723887375 1101.0 observed 1 0
GM666873 Ostreococcus sp. 'lucimarinus' 58.1730769230769 1248.0 observed 1 0
HB412652 Ostreococcus sp. 'lucimarinus' 53.6175710594315 1548.0 observed 1 0
HC357683 Ostreococcus sp. 'lucimarinus' 60.2622576966933 1754.0 observed 0 0
HC468238 Ostreococcus sp. 'lucimarinus' 56.3786008230453 243.0 observed 1 1
HC500150 Ostreococcus sp. 'lucimarinus' 58.6455331412104 1388.0 observed 1 0
HC504723 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
HC509065 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
HC509764 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
HC521173 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
HC521175 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
HC521177 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
HC521179 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
HC521181 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
HC521183 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
HC521185 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
HC521187 Ostreococcus sp. 'lucimarinus' 45.3703703703704 864.0 observed 1 0
HC733591 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
HC733593 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
HC733595 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
HC733597 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
HC733599 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
HC733601 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
HC733603 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
HC733605 Ostreococcus sp. 'lucimarinus' 45.3703703703704 864.0 observed 1 0
HC877181 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
HC877528 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
HC880477 Ostreococcus sp. 'lucimarinus' 64.42989634479 1833.0 observed 1 0
HD048425 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
HD048814 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
HD050812 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
HH802719 Ostreococcus sp. 'lucimarinus' 66.3299663299663 594.0 observed 1 1
HH804879 Ostreococcus sp. 'lucimarinus' 62.8368794326241 1410.0 observed 1 1
HH932637 Ostreococcus sp. 'lucimarinus' 66.3120567375886 1410.0 observed 1 0
HH932639 Ostreococcus sp. 'lucimarinus' 62.2502628811777 951.0 observed 1 0
HH932641 Ostreococcus sp. 'lucimarinus' 56.047197640118 1017.0 observed 1 0
HH932643 Ostreococcus sp. 'lucimarinus' 57.3599240265907 1053.0 observed 1 0
HI660906 Ostreococcus sp. 'lucimarinus' 56.0267857142857 1344.0 observed 1 1
HV332588 Ostreococcus sp. 'lucimarinus' 66.3120567375886 1410.0 observed 1 1
HV332589 Ostreococcus sp. 'lucimarinus' 62.2502628811777 951.0 observed 1 1
HV332590 Ostreococcus sp. 'lucimarinus' 56.047197640118 1017.0 observed 1 1
HV332591 Ostreococcus sp. 'lucimarinus' 57.3599240265907 1053.0 observed 1 1
HV699214 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 1
HV757238 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 1
HW268193 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
HZ406855 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
HZ423539 Ostreococcus sp. 'lucimarinus' 50.5903723887375 1101.0 observed 1 1
HZ471270 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
JA223045 Ostreococcus sp. 'lucimarinus' 56.2745098039216 1020.0 observed 1 1
JA223047 Ostreococcus sp. 'lucimarinus' 57.5569358178054 966.0 observed 1 1
JA223049 Ostreococcus sp. 'lucimarinus' 59.4936708860759 1185.0 observed 1 1
JA223312 Ostreococcus sp. 'lucimarinus' 56.4957264957265 1170.0 observed 1 1
JA223360 Ostreococcus sp. 'lucimarinus' 57.6032225579053 993.0 observed 1 1
JA466946 Ostreococcus sp. 'lucimarinus' 51.3513513513514 222.0 observed 1 1
JA663690 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
JB232303 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 1
JB241330 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
JB255643 Ostreococcus sp. 'lucimarinus' 53.6175710594315 1548.0 observed 1 0
JB286841 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
JB309444 Ostreococcus sp. 'lucimarinus' 59.1526778577138 1251.0 observed 1 1
JB309446 Ostreococcus sp. 'lucimarinus' 57.4500768049155 1302.0 observed 1 1
JB331916 Ostreococcus sp. 'lucimarinus' 61.4114114114114 1332.0 observed 1 1
JB331918 Ostreococcus sp. 'lucimarinus' 52.4166666666667 1200.0 observed 1 1
JB335158 Ostreococcus sp. 'lucimarinus' 59.9300087489064 1143.0 observed 1 0
JB350752 Ostreococcus sp. 'lucimarinus' 53.6082474226804 582.0 observed 1 1
JB414411 Ostreococcus sp. 'lucimarinus' 60.8915906788247 987.0 observed 1 1
JB742099 Ostreococcus sp. 'lucimarinus' 55.2532123960695 1323.0 observed 1 1
JB742171 Ostreococcus sp. 'lucimarinus' 56.0773480662983 2172.0 observed 1 1
JB742203 Ostreococcus sp. 'lucimarinus' 60.2910602910603 1443.0 observed 1 0
JC203755 Ostreococcus sp. 'lucimarinus' 55.1454138702461 894.0 observed 1 1
JC253170 Ostreococcus sp. 'lucimarinus' 58.1730769230769 1248.0 observed 1 1
JC278959 Ostreococcus sp. 'lucimarinus' 54.9773755656109 1326.0 observed 1 1
JC299126 Ostreococcus sp. 'lucimarinus' 59.3650793650794 315.0 observed 1 1
JC341841 Ostreococcus sp. 'lucimarinus' 58.1730769230769 1248.0 observed 1 0
JC470859 Ostreococcus sp. 'lucimarinus' 58.1730769230769 1248.0 observed 1 0
JC551473 Ostreococcus sp. 'lucimarinus' 60.0896860986547 669.0 observed 1 1
JC738518 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
JE862984 Ostreococcus sp. 'lucimarinus' 58.6455331412104 1388.0 observed 1 0
LF709991 Ostreococcus sp. 'lucimarinus' 57.981220657277 1704.0 observed 1 0
LG045234 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
LP053805 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
LQ417615 Ostreococcus sp. 'lucimarinus' 60.6872852233677 1455.0 observed 1 1
LQ417635 Ostreococcus sp. 'lucimarinus' 58.4876543209877 1296.0 observed 1 1
LQ606313 Ostreococcus sp. 'lucimarinus' 53.6082474226804 582.0 observed 1 0
LQ654796 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
LQ976061 Ostreococcus sp. 'lucimarinus' 60.2622576966933 1754.0 observed 0 0
LQ991722 Ostreococcus sp. 'lucimarinus' 53.6175710594315 1548.0 observed 1 0
LQ995779 Ostreococcus sp. 'lucimarinus' 53.6175710594315 1548.0 observed 1 0
LV578312 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0
LY344952 Ostreococcus sp. 'lucimarinus' 57.9710144927536 1449.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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