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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

20 rows where Species_name = "Paralichthys olivaceus"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 1 18
  • 0 2

Is_annotated 2

  • 0 18
  • 1 2

Species_name 1

  • Paralichthys olivaceus · 20 ✖

Sequence_status 1

  • observed 20
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI186362 Paralichthys olivaceus 55.7929334428924 1217.0 observed 1 0
DI373672 Paralichthys olivaceus 52.753108348135 563.0 observed 1 0
DI373673 Paralichthys olivaceus 54.8693586698337 421.0 observed 1 0
E08617 Paralichthys olivaceus 51.6957364341085 2064.0 observed 1 0
E08618 Paralichthys olivaceus 51.4897579143389 2148.0 observed 0 0
E08619 Paralichthys olivaceus 51.7441860465116 2064.0 observed 1 0
E08624 Paralichthys olivaceus 51.536312849162 2148.0 observed 0 0
E08878 Paralichthys olivaceus 54.5454545454545 561.0 observed 1 1
HB926241 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 1
HB938247 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HB942980 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HB954351 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HB966949 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HC983650 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HC995656 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HD000390 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HD011761 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HD024359 Paralichthys olivaceus 52.6610644257703 714.0 observed 1 0
HW318632 Paralichthys olivaceus 44.7154471544715 492.0 observed 1 0
HW318633 Paralichthys olivaceus 55.1789077212806 531.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 380.003ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT