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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

254 rows where Species_name = "Phaeodactylum tricornutum"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX481611 Phaeodactylum tricornutum 51.452784503632 1652.0 observed 0 0
AX481613 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
AX481615 Phaeodactylum tricornutum 50.9993943064809 1651.0 observed 0 0
AX481621 Phaeodactylum tricornutum 54.8492791612058 1526.0 observed 0 0
AX481628 Phaeodactylum tricornutum 57.5617283950617 648.0 observed 1 0
AX481940 Phaeodactylum tricornutum 51.452784503632 1652.0 observed 0 0
AX481942 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
AX481944 Phaeodactylum tricornutum 50.9993943064809 1651.0 observed 0 0
AX481950 Phaeodactylum tricornutum 54.8492791612058 1526.0 observed 0 0
AX481957 Phaeodactylum tricornutum 57.5617283950617 648.0 observed 1 0
AX951573 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
AX951581 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CQ768399 Phaeodactylum tricornutum 55.8280028429282 2814.0 observed 1 0
CQ768401 Phaeodactylum tricornutum 54.5711592836946 3183.0 observed 0 0
CQ768403 Phaeodactylum tricornutum 60.6 500.0 observed 0 0
CQ831424 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CQ874858 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CQ874877 Phaeodactylum tricornutum 57.3804573804574 1443.0 observed 0 0
CQ891284 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CQ891290 Phaeodactylum tricornutum 50.9858044164038 17752.0 observed 0 0
CQ891303 Phaeodactylum tricornutum 57.3804573804574 1443.0 observed 0 0
CQ891305 Phaeodactylum tricornutum 51.1986401734951 17061.0 observed 0 0
CS020051 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CS020067 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
CS020229 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
CS160819 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CS160835 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
CS160997 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
CS246967 Phaeodactylum tricornutum 51.452784503632 1652.0 observed 0 0
CS486215 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
CS486239 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
CS486269 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
CS721303 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
CS721445 Phaeodactylum tricornutum 46.3560334528077 837.0 observed 1 1
DD087795 Phaeodactylum tricornutum 51.452784503632 1652.0 observed 0 0
DD087796 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
DD087797 Phaeodactylum tricornutum 50.9993943064809 1651.0 observed 0 0
DD087800 Phaeodactylum tricornutum 54.8492791612058 1526.0 observed 0 0
DD087806 Phaeodactylum tricornutum 57.5617283950617 648.0 observed 1 1
DD360089 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
DD467605 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
DD467613 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
DD467716 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
DI341465 Phaeodactylum tricornutum 53.288740245262 897.0 observed 1 1
DI341466 Phaeodactylum tricornutum 53.3663366336634 3030.0 observed 1 1
DI341468 Phaeodactylum tricornutum 51.9362186788155 2634.0 observed 1 1
DI495055 Phaeodactylum tricornutum 54.3262411347518 1410.0 observed 1 1
DI495664 Phaeodactylum tricornutum 54.3262411347518 1410.0 observed 1 0
DJ418281 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
DJ418289 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
DJ418392 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
DL074829 Phaeodactylum tricornutum 51.452784503632 1652.0 observed 0 0
FB749643 Phaeodactylum tricornutum 49.1228070175439 1254.0 observed 1 0
FB790246 Phaeodactylum tricornutum 51.7171717171717 1980.0 observed 1 1
FB808795 Phaeodactylum tricornutum 55.982905982906 1638.0 observed 1 1
FB848941 Phaeodactylum tricornutum 51.7171717171717 1980.0 observed 1 0
FB864969 Phaeodactylum tricornutum 55.982905982906 1638.0 observed 1 0
GM711839 Phaeodactylum tricornutum 53.394355453852 1311.0 observed 1 0
GM738963 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
GM738965 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
GN102439 Phaeodactylum tricornutum 36.484593837535 1428.0 observed 1 1
HB394467 Phaeodactylum tricornutum 53.7037037037037 1566.0 observed 1 1
HB394469 Phaeodactylum tricornutum 53.768115942029 1380.0 observed 1 1
HB394471 Phaeodactylum tricornutum 51.9135802469136 1620.0 observed 1 1
HB394473 Phaeodactylum tricornutum 54.6902654867257 1695.0 observed 1 0
HB394475 Phaeodactylum tricornutum 49.7425997425997 1554.0 observed 1 0
HB394477 Phaeodactylum tricornutum 52.1713615023474 1704.0 observed 1 0
HB394479 Phaeodactylum tricornutum 54.1741741741742 1665.0 observed 1 0
HB394481 Phaeodactylum tricornutum 51.9753086419753 1620.0 observed 1 0
HB437651 Phaeodactylum tricornutum 37.9134860050891 393.0 observed 1 1
HB660305 Phaeodactylum tricornutum 51.7171717171717 1980.0 observed 1 0
HB678854 Phaeodactylum tricornutum 55.982905982906 1638.0 observed 1 0
HB719000 Phaeodactylum tricornutum 51.7171717171717 1980.0 observed 1 0
HB735028 Phaeodactylum tricornutum 55.982905982906 1638.0 observed 1 0
HB957880 Phaeodactylum tricornutum 52.0 1350.0 observed 1 1
HB957882 Phaeodactylum tricornutum 54.0723981900452 1326.0 observed 1 1
HC055922 Phaeodactylum tricornutum 51.965811965812 1170.0 observed 1 0
HC302289 Phaeodactylum tricornutum 53.3173461231015 1251.0 observed 1 0
HC357709 Phaeodactylum tricornutum 47.8919631093544 1518.0 observed 1 0
HC357711 Phaeodactylum tricornutum 51.5296940611878 1667.0 observed 0 0
HC475480 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC475496 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC475658 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC475672 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC475688 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC475850 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC475864 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC475880 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC476042 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC476056 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC476072 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC476234 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC476248 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC476264 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC476426 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC476440 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC476456 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0
HC476618 Phaeodactylum tricornutum 44.9144008056395 993.0 observed 0 0
HC476632 Phaeodactylum tricornutum 53.758865248227 1410.0 observed 1 0
HC476648 Phaeodactylum tricornutum 57.6011157601116 1434.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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