Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
34 rows where Species_name = "Piscirickettsia salmonis"
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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| AX252409 | Piscirickettsia salmonis | 42.3267326732673 | 404.0 | observed | 0 | 0 |
| AX252411 | Piscirickettsia salmonis | 41.1167512690355 | 591.0 | observed | 1 | 1 |
| AX252413 | Piscirickettsia salmonis | 45.6032719836401 | 489.0 | observed | 1 | 1 |
| AX252415 | Piscirickettsia salmonis | 37.7049180327869 | 1098.0 | observed | 0 | 0 |
| AX252418 | Piscirickettsia salmonis | 39.0243902439024 | 164.0 | observed | 0 | 0 |
| AX252420 | Piscirickettsia salmonis | 44.6153846153846 | 195.0 | observed | 1 | 0 |
| AX252422 | Piscirickettsia salmonis | 42.7230046948357 | 213.0 | observed | 1 | 0 |
| AX252424 | Piscirickettsia salmonis | 37.3913043478261 | 115.0 | observed | 0 | 0 |
| AX252426 | Piscirickettsia salmonis | 39.1061452513966 | 179.0 | observed | 0 | 0 |
| AX252428 | Piscirickettsia salmonis | 47.6923076923077 | 390.0 | observed | 0 | 0 |
| AX252430 | Piscirickettsia salmonis | 40.0 | 280.0 | observed | 1 | 0 |
| AX252432 | Piscirickettsia salmonis | 51.1764705882353 | 170.0 | observed | 0 | 0 |
| AX252434 | Piscirickettsia salmonis | 45.2261306532663 | 199.0 | observed | 0 | 0 |
| AX252436 | Piscirickettsia salmonis | 41.6 | 375.0 | observed | 1 | 0 |
| CS079008 | Piscirickettsia salmonis | 41.7047184170472 | 1314.0 | observed | 1 | 1 |
| CS079010 | Piscirickettsia salmonis | 41.5865384615385 | 1248.0 | observed | 1 | 1 |
| CS079012 | Piscirickettsia salmonis | 38.9101338432122 | 2092.0 | observed | 0 | 0 |
| CS417588 | Piscirickettsia salmonis | 41.7047184170472 | 1314.0 | observed | 1 | 0 |
| CS417590 | Piscirickettsia salmonis | 41.5865384615385 | 1248.0 | observed | 1 | 0 |
| CS417592 | Piscirickettsia salmonis | 42.2101449275362 | 1104.0 | observed | 1 | 1 |
| CS417594 | Piscirickettsia salmonis | 34.1666666666667 | 120.0 | observed | 0 | 0 |
| CS417596 | Piscirickettsia salmonis | 39.3229166666667 | 384.0 | observed | 1 | 1 |
| CS417598 | Piscirickettsia salmonis | 38.2222222222222 | 225.0 | observed | 1 | 1 |
| CS417600 | Piscirickettsia salmonis | 37.8600823045267 | 243.0 | observed | 1 | 1 |
| CS417602 | Piscirickettsia salmonis | 44.0625 | 960.0 | observed | 1 | 0 |
| CS417604 | Piscirickettsia salmonis | 46.7403958090803 | 1718.0 | observed | 1 | 1 |
| CS417606 | Piscirickettsia salmonis | 38.9579349904398 | 2092.0 | observed | 0 | 0 |
| HB446927 | Piscirickettsia salmonis | 35.531914893617 | 2820.0 | observed | 1 | 0 |
| HB446929 | Piscirickettsia salmonis | 35.3341336534614 | 2499.0 | observed | 1 | 0 |
| HB446942 | Piscirickettsia salmonis | 38.9579349904398 | 2092.0 | observed | 0 | 0 |
| MS810629 | Piscirickettsia salmonis | 44.284188034188 | 1872.0 | observed | 1 | 1 |
| MS810632 | Piscirickettsia salmonis | 29.8325722983257 | 657.0 | observed | 0 | 0 |
| MS810635 | Piscirickettsia salmonis | 42.1661409043112 | 951.0 | observed | 1 | 1 |
| MS810638 | Piscirickettsia salmonis | 46.9994957135653 | 1983.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);