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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

167 rows where Species_name = "Prochlorococcus marinus str. mit 9313"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB334275 Prochlorococcus marinus str. mit 9313 55.7090239410681 2172.0 observed 1 1
FB336227 Prochlorococcus marinus str. mit 9313 51.5151515151515 759.0 observed 1 1
FB832192 Prochlorococcus marinus str. mit 9313 55.278310940499 1563.0 observed 1 1
FB834344 Prochlorococcus marinus str. mit 9313 47.7777777777778 360.0 observed 1 1
FB853341 Prochlorococcus marinus str. mit 9313 55.278310940499 1563.0 observed 1 0
GM954711 Prochlorococcus marinus str. mit 9313 52.3545706371191 1083.0 observed 1 0
GM956969 Prochlorococcus marinus str. mit 9313 52.1311475409836 915.0 observed 1 1
GM959654 Prochlorococcus marinus str. mit 9313 50.958391771856 2139.0 observed 1 1
GN095940 Prochlorococcus marinus str. mit 9313 55.3030303030303 1452.0 observed 1 1
GN096422 Prochlorococcus marinus str. mit 9313 52.3545706371191 1083.0 observed 1 0
GN098842 Prochlorococcus marinus str. mit 9313 53.3822330888346 1227.0 observed 1 1
GN105471 Prochlorococcus marinus str. mit 9313 46.9458987783595 573.0 observed 1 1
GN108474 Prochlorococcus marinus str. mit 9313 57.7235772357724 492.0 observed 1 1
GN108963 Prochlorococcus marinus str. mit 9313 51.4166666666667 1200.0 observed 1 1
GN117358 Prochlorococcus marinus str. mit 9313 54.0913006029285 1161.0 observed 1 1
GN120683 Prochlorococcus marinus str. mit 9313 50.471436494731 1803.0 observed 1 1
GN124707 Prochlorococcus marinus str. mit 9313 53.8567493112948 726.0 observed 1 1
GN124884 Prochlorococcus marinus str. mit 9313 50.2645502645503 756.0 observed 1 1
GN126001 Prochlorococcus marinus str. mit 9313 59.1820987654321 1296.0 observed 1 1
GN126431 Prochlorococcus marinus str. mit 9313 57.7836411609499 1137.0 observed 1 1
GN126433 Prochlorococcus marinus str. mit 9313 55.2006552006552 1221.0 observed 1 1
GN126902 Prochlorococcus marinus str. mit 9313 56.1194029850746 2010.0 observed 1 1
GN128883 Prochlorococcus marinus str. mit 9313 54.0913006029285 1161.0 observed 1 0
HB439420 Prochlorococcus marinus str. mit 9313 55.8469945355191 915.0 observed 1 1
HB443416 Prochlorococcus marinus str. mit 9313 55.3030303030303 1452.0 observed 1 0
HB462241 Prochlorococcus marinus str. mit 9313 56.4596716630978 1401.0 observed 1 1
HB702251 Prochlorococcus marinus str. mit 9313 55.278310940499 1563.0 observed 1 0
HB704403 Prochlorococcus marinus str. mit 9313 47.7777777777778 360.0 observed 1 0
HB723400 Prochlorococcus marinus str. mit 9313 55.278310940499 1563.0 observed 1 0
HB817938 Prochlorococcus marinus str. mit 9313 55.278310940499 1563.0 observed 1 0
HB820134 Prochlorococcus marinus str. mit 9313 47.7777777777778 360.0 observed 1 0
HB867713 Prochlorococcus marinus str. mit 9313 56.4596716630978 1401.0 observed 1 0
HB868151 Prochlorococcus marinus str. mit 9313 56.4596716630978 1401.0 observed 1 0
HB871025 Prochlorococcus marinus str. mit 9313 53.2467532467533 1848.0 observed 1 1
HB871027 Prochlorococcus marinus str. mit 9313 49.7652582159624 1917.0 observed 1 1
HB871029 Prochlorococcus marinus str. mit 9313 53.0883919062833 1878.0 observed 1 1
HB871291 Prochlorococcus marinus str. mit 9313 56.7275185936444 1479.0 observed 1 0
HB885543 Prochlorococcus marinus str. mit 9313 53.2467532467533 1848.0 observed 1 0
HB885545 Prochlorococcus marinus str. mit 9313 49.7652582159624 1917.0 observed 1 0
HB885547 Prochlorococcus marinus str. mit 9313 53.0883919062833 1878.0 observed 1 0
HB885805 Prochlorococcus marinus str. mit 9313 56.7275185936444 1479.0 observed 1 0
HB889499 Prochlorococcus marinus str. mit 9313 56.7275185936444 1479.0 observed 1 0
HB891176 Prochlorococcus marinus str. mit 9313 56.7275185936444 1479.0 observed 1 0
HB894460 Prochlorococcus marinus str. mit 9313 56.7275185936444 1479.0 observed 1 0
HB901870 Prochlorococcus marinus str. mit 9313 49.528563505269 1803.0 observed 1 1
HB901872 Prochlorococcus marinus str. mit 9313 53.5893155258765 1797.0 observed 1 1
HB904471 Prochlorococcus marinus str. mit 9313 55.2083333333333 1248.0 observed 1 1
HB906959 Prochlorococcus marinus str. mit 9313 54.8064918851436 801.0 observed 1 1
HB908175 Prochlorococcus marinus str. mit 9313 45.1541850220264 1362.0 observed 1 1
HB910454 Prochlorococcus marinus str. mit 9313 40.1028277634961 1167.0 observed 1 1
HB910456 Prochlorococcus marinus str. mit 9313 53.3822330888346 1227.0 observed 1 0
HB912653 Prochlorococcus marinus str. mit 9313 53.0968468468469 1776.0 observed 1 1
HB912655 Prochlorococcus marinus str. mit 9313 55.465367965368 1848.0 observed 1 1
HB913047 Prochlorococcus marinus str. mit 9313 56.1157796451914 1071.0 observed 1 1
HB917389 Prochlorococcus marinus str. mit 9313 54.9822964087001 1977.0 observed 1 1
HB920668 Prochlorococcus marinus str. mit 9313 52.0388349514563 1545.0 observed 1 1
HB924558 Prochlorococcus marinus str. mit 9313 54.9822964087001 1977.0 observed 1 0
HB929242 Prochlorococcus marinus str. mit 9313 53.1208499335989 753.0 observed 1 0
HB930142 Prochlorococcus marinus str. mit 9313 53.0968468468469 1776.0 observed 1 0
HB930144 Prochlorococcus marinus str. mit 9313 55.465367965368 1848.0 observed 1 0
HB930490 Prochlorococcus marinus str. mit 9313 56.1157796451914 1071.0 observed 1 0
HB931764 Prochlorococcus marinus str. mit 9313 55.0724637681159 1449.0 observed 1 1
HB932521 Prochlorococcus marinus str. mit 9313 52.5904203323558 1023.0 observed 1 1
HB933412 Prochlorococcus marinus str. mit 9313 40.1028277634961 1167.0 observed 1 0
HB933414 Prochlorococcus marinus str. mit 9313 53.3822330888346 1227.0 observed 1 0
HB936454 Prochlorococcus marinus str. mit 9313 49.528563505269 1803.0 observed 1 0
HB936456 Prochlorococcus marinus str. mit 9313 53.5893155258765 1797.0 observed 1 0
HB940984 Prochlorococcus marinus str. mit 9313 54.8758865248227 1128.0 observed 1 1
HB941667 Prochlorococcus marinus str. mit 9313 45.607911576498 3438.0 observed 1 1
HB945640 Prochlorococcus marinus str. mit 9313 53.1208499335989 753.0 observed 1 0
HB946885 Prochlorococcus marinus str. mit 9313 53.3542976939203 1908.0 observed 1 1
HB947569 Prochlorococcus marinus str. mit 9313 56.1157796451914 1071.0 observed 1 0
HB948296 Prochlorococcus marinus str. mit 9313 55.0724637681159 1449.0 observed 1 0
HB949583 Prochlorococcus marinus str. mit 9313 51.1033681765389 1722.0 observed 1 1
HB956358 Prochlorococcus marinus str. mit 9313 55.0724637681159 1449.0 observed 1 0
HB959322 Prochlorococcus marinus str. mit 9313 53.1208499335989 753.0 observed 1 0
HB960448 Prochlorococcus marinus str. mit 9313 54.9822964087001 1977.0 observed 1 0
HB960995 Prochlorococcus marinus str. mit 9313 55.2083333333333 1248.0 observed 1 0
HB962270 Prochlorococcus marinus str. mit 9313 58.2591493570722 1011.0 observed 1 1
HB963242 Prochlorococcus marinus str. mit 9313 52.5904203323558 1023.0 observed 1 0
HB965160 Prochlorococcus marinus str. mit 9313 53.0968468468469 1776.0 observed 1 0
HB965162 Prochlorococcus marinus str. mit 9313 55.465367965368 1848.0 observed 1 0
HB965383 Prochlorococcus marinus str. mit 9313 54.096834264432 2148.0 observed 1 1
HB968199 Prochlorococcus marinus str. mit 9313 58.6080586080586 819.0 observed 1 0
HB968768 Prochlorococcus marinus str. mit 9313 56.4596716630978 1401.0 observed 1 0
HB969232 Prochlorococcus marinus str. mit 9313 57.7114427860696 1206.0 observed 1 1
HB970880 Prochlorococcus marinus str. mit 9313 56.1616161616162 495.0 observed 1 1
HB973739 Prochlorococcus marinus str. mit 9313 55.2275522755228 813.0 observed 1 1
HC495303 Prochlorococcus marinus str. mit 9313 54.8125633232016 987.0 observed 1 0
HC496134 Prochlorococcus marinus str. mit 9313 54.1802388707926 921.0 observed 1 1
HC496805 Prochlorococcus marinus str. mit 9313 49.1115849324804 1407.0 observed 1 1
HC496963 Prochlorococcus marinus str. mit 9313 56.6798941798942 1512.0 observed 1 1
HC498652 Prochlorococcus marinus str. mit 9313 54.8125633232016 987.0 observed 1 0
HC499506 Prochlorococcus marinus str. mit 9313 49.1115849324804 1407.0 observed 1 0
HC499664 Prochlorococcus marinus str. mit 9313 56.6798941798942 1512.0 observed 1 0
HC506978 Prochlorococcus marinus str. mit 9313 54.002624671916 1524.0 observed 1 0
HC750573 Prochlorococcus marinus str. mit 9313 58.4816132858838 843.0 observed 1 1
HC752792 Prochlorococcus marinus str. mit 9313 55.5813953488372 1290.0 observed 1 1
HC753702 Prochlorococcus marinus str. mit 9313 42.620232172471 603.0 observed 1 1
HC903496 Prochlorococcus marinus str. mit 9313 55.3030303030303 1452.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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