Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
7 rows where Species_name = "Pseudoalteromonas atlantica"
This data as json, CSV (advanced)
Species_name 1
- Pseudoalteromonas atlantica · 7 ✖
Sequence_status 1
- observed 7
Is_protein_coding_sequence 1
- 1 7
Is_annotated 1
- 1 7
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
DI490624 | Pseudoalteromonas atlantica | 46.0350877192982 | 1425.0 | observed | 1 | 1 |
DI490625 | Pseudoalteromonas atlantica | 44.0894568690096 | 939.0 | observed | 1 | 1 |
DI490626 | Pseudoalteromonas atlantica | 47.7737665463297 | 831.0 | observed | 1 | 1 |
HC924501 | Pseudoalteromonas atlantica | 47.1422611597831 | 2397.0 | observed | 1 | 1 |
HW056066 | Pseudoalteromonas atlantica | 40.4504504504504 | 2220.0 | observed | 1 | 1 |
HW056067 | Pseudoalteromonas atlantica | 39.3094289508632 | 2259.0 | observed | 1 | 1 |
HW056068 | Pseudoalteromonas atlantica | 40.9863945578231 | 1176.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );