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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

186 rows where Species_name = "Pyrobaculum aerophilum"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX555727 Pyrobaculum aerophilum 61.5384615384615 26.0 observed 0 0
AX555728 Pyrobaculum aerophilum 57.6923076923077 26.0 observed 0 0
AX555781 Pyrobaculum aerophilum 45.1612903225806 31.0 observed 0 0
AX555782 Pyrobaculum aerophilum 47.0588235294118 34.0 observed 0 0
AX555783 Pyrobaculum aerophilum 50.240153698367 1041.0 observed 1 1
CS318869 Pyrobaculum aerophilum 55.609756097561 615.0 observed 1 1
CS644841 Pyrobaculum aerophilum 47.7011494252874 174.0 observed 1 0
CS644842 Pyrobaculum aerophilum 47.1264367816092 174.0 observed 1 0
CS644844 Pyrobaculum aerophilum 45.6140350877193 171.0 observed 1 0
CS668142 Pyrobaculum aerophilum 47.7011494252874 174.0 observed 1 0
CS668143 Pyrobaculum aerophilum 47.1264367816092 174.0 observed 1 0
CS668145 Pyrobaculum aerophilum 45.6140350877193 171.0 observed 1 0
DD135639 Pyrobaculum aerophilum 61.5384615384615 26.0 observed 0 0
DD135640 Pyrobaculum aerophilum 57.6923076923077 26.0 observed 0 0
DD236497 Pyrobaculum aerophilum 56.3876651982379 681.0 observed 1 1
FB335506 Pyrobaculum aerophilum 49.2329149232915 717.0 observed 1 1
FB784091 Pyrobaculum aerophilum 51.2328767123288 1095.0 observed 1 1
FB791641 Pyrobaculum aerophilum 51.2328767123288 1095.0 observed 1 0
FB793687 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 1
FB807804 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
FB835453 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
FB842854 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
FB863515 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
FB883092 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
FW553257 Pyrobaculum aerophilum 55.609756097561 615.0 observed 1 0
GM959428 Pyrobaculum aerophilum 53.574115876599 1329.0 observed 1 1
GN101145 Pyrobaculum aerophilum 49.1150442477876 1356.0 observed 1 1
GN102756 Pyrobaculum aerophilum 46.7224546722455 717.0 observed 1 1
GN128458 Pyrobaculum aerophilum 54.2458808618504 789.0 observed 1 1
HB437971 Pyrobaculum aerophilum 57.9601990049751 402.0 observed 1 1
HB444167 Pyrobaculum aerophilum 43.125 960.0 observed 1 1
HB444169 Pyrobaculum aerophilum 51.25 960.0 observed 1 1
HB444171 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 1
HB654150 Pyrobaculum aerophilum 51.2328767123288 1095.0 observed 1 0
HB661700 Pyrobaculum aerophilum 51.2328767123288 1095.0 observed 1 0
HB663746 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB677863 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB705512 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB712913 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB733574 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB753151 Pyrobaculum aerophilum 47.6874003189793 627.0 observed 1 0
HB868306 Pyrobaculum aerophilum 51.0822510822511 693.0 observed 1 1
HB869014 Pyrobaculum aerophilum 57.1111111111111 900.0 observed 1 1
HB870827 Pyrobaculum aerophilum 48.224043715847 732.0 observed 1 1
HB880960 Pyrobaculum aerophilum 54.1293532338308 1005.0 observed 1 1
HB882023 Pyrobaculum aerophilum 48.2843137254902 1224.0 observed 1 1
HB884271 Pyrobaculum aerophilum 53.574115876599 1329.0 observed 1 0
HB884651 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 1
HB886177 Pyrobaculum aerophilum 48.5833333333333 1200.0 observed 1 1
HB886587 Pyrobaculum aerophilum 50.3472222222222 1152.0 observed 1 1
HB887385 Pyrobaculum aerophilum 50.5836575875486 771.0 observed 1 1
HB887387 Pyrobaculum aerophilum 50.314465408805 795.0 observed 1 1
HB888175 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB889243 Pyrobaculum aerophilum 51.0822510822511 693.0 observed 1 0
HB891630 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB892376 Pyrobaculum aerophilum 51.9877675840979 327.0 observed 1 1
HB893908 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB895142 Pyrobaculum aerophilum 43.125 960.0 observed 1 0
HB895144 Pyrobaculum aerophilum 51.25 960.0 observed 1 0
HB895146 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 0
HB896727 Pyrobaculum aerophilum 59.7130242825607 906.0 observed 1 1
HB897918 Pyrobaculum aerophilum 56.020942408377 573.0 observed 1 1
HB899245 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 1
HB899600 Pyrobaculum aerophilum 48.2843137254902 1224.0 observed 1 0
HB904932 Pyrobaculum aerophilum 51.9877675840979 327.0 observed 1 0
HB908540 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB909521 Pyrobaculum aerophilum 51.9877675840979 327.0 observed 1 0
HB910092 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 0
HB912560 Pyrobaculum aerophilum 59.7130242825607 906.0 observed 1 0
HB914070 Pyrobaculum aerophilum 43.125 960.0 observed 1 0
HB914072 Pyrobaculum aerophilum 51.25 960.0 observed 1 0
HB914074 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 0
HB915015 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB915507 Pyrobaculum aerophilum 43.125 960.0 observed 1 0
HB915509 Pyrobaculum aerophilum 51.25 960.0 observed 1 0
HB915511 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 0
HB916724 Pyrobaculum aerophilum 43.125 960.0 observed 1 0
HB916726 Pyrobaculum aerophilum 51.25 960.0 observed 1 0
HB916728 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 0
HB923328 Pyrobaculum aerophilum 43.125 960.0 observed 1 0
HB923330 Pyrobaculum aerophilum 51.25 960.0 observed 1 0
HB923332 Pyrobaculum aerophilum 50.057273768614 873.0 observed 1 0
HB927125 Pyrobaculum aerophilum 59.7130242825607 906.0 observed 1 0
HB927994 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB930966 Pyrobaculum aerophilum 51.9877675840979 327.0 observed 1 0
HB932216 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 0
HB939406 Pyrobaculum aerophilum 46.4317976513098 2214.0 observed 1 0
HB940072 Pyrobaculum aerophilum 52.7593818984547 906.0 observed 1 1
HB944472 Pyrobaculum aerophilum 56.020942408377 573.0 observed 1 0
HB946340 Pyrobaculum aerophilum 50.9881422924901 1518.0 observed 1 1
HB948995 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 0
HB953726 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 0
HB955048 Pyrobaculum aerophilum 59.7130242825607 906.0 observed 1 0
HB955704 Pyrobaculum aerophilum 52.7593818984547 906.0 observed 1 0
HB957057 Pyrobaculum aerophilum 46.9858156028369 564.0 observed 1 0
HB958094 Pyrobaculum aerophilum 47.921760391198 1227.0 observed 1 1
HB958372 Pyrobaculum aerophilum 52.5977816695855 1713.0 observed 1 1
HB958931 Pyrobaculum aerophilum 59.7130242825607 906.0 observed 1 0
HB968599 Pyrobaculum aerophilum 54.2458808618504 789.0 observed 1 0
HC496638 Pyrobaculum aerophilum 56.078431372549 765.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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