home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

166 rows where Species_name = "Pyrococcus abyssi"

✎ View and edit SQL

This data as json, CSV (advanced)

Is_protein_coding_sequence 2

  • 1 165
  • 0 1

Is_annotated 2

  • 0 98
  • 1 68

Species_name 1

  • Pyrococcus abyssi · 166 ✖

Sequence_status 1

  • observed 166
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX077080 Pyrococcus abyssi 44.5807770961145 489.0 observed 1 1
AX363431 Pyrococcus abyssi 42.5373134328358 134.0 observed 0 0
AX700692 Pyrococcus abyssi 46.7213114754098 732.0 observed 1 1
BD292309 Pyrococcus abyssi 44.5807770961145 489.0 observed 1 0
CQ976030 Pyrococcus abyssi 47.8174603174603 1008.0 observed 1 1
CS318806 Pyrococcus abyssi 47.2081218274112 591.0 observed 1 1
CS398326 Pyrococcus abyssi 47.5409836065574 1281.0 observed 1 1
CS398328 Pyrococcus abyssi 50.9337860780985 1767.0 observed 1 1
CS469296 Pyrococcus abyssi 44.7604790419162 668.0 observed 1 1
CS469298 Pyrococcus abyssi 44.6969696969697 660.0 observed 1 1
CS469300 Pyrococcus abyssi 46.0227272727273 528.0 observed 1 1
CS497608 Pyrococcus abyssi 46.7270896273917 993.0 observed 1 1
CS497768 Pyrococcus abyssi 48.9096573208723 1284.0 observed 1 1
DD159220 Pyrococcus abyssi 47.7922077922078 1155.0 observed 1 1
DD225651 Pyrococcus abyssi 50.6944444444444 1296.0 observed 1 1
DD402700 Pyrococcus abyssi 45.9086993970715 1161.0 observed 1 1
DD410276 Pyrococcus abyssi 44.9275362318841 552.0 observed 1 1
DI402963 Pyrococcus abyssi 51.005291005291 945.0 observed 1 0
DJ328620 Pyrococcus abyssi 47.8174603174603 1008.0 observed 1 0
DJ432304 Pyrococcus abyssi 41.5584415584416 693.0 observed 1 0
FB334044 Pyrococcus abyssi 51.8390804597701 870.0 observed 1 1
FB335504 Pyrococcus abyssi 43.0188679245283 795.0 observed 1 1
FB336563 Pyrococcus abyssi 46.9298245614035 228.0 observed 1 1
FB783985 Pyrococcus abyssi 43.8056125941136 1461.0 observed 1 1
FB791535 Pyrococcus abyssi 43.8056125941136 1461.0 observed 1 0
FB793685 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 1
FB807802 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
FB832557 Pyrococcus abyssi 45.9905660377358 1272.0 observed 1 1
FB835451 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
FB842852 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
FB863513 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
FB883090 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
FW553226 Pyrococcus abyssi 47.2081218274112 591.0 observed 1 0
GM958348 Pyrococcus abyssi 49.0926456542502 1047.0 observed 1 1
GM965649 Pyrococcus abyssi 45.9905660377358 1272.0 observed 1 0
GN101143 Pyrococcus abyssi 46.7836257309942 1368.0 observed 1 1
GN102754 Pyrococcus abyssi 48.6338797814208 732.0 observed 1 1
GN104832 Pyrococcus abyssi 47.1573907839617 1671.0 observed 1 1
GN108820 Pyrococcus abyssi 45.3333333333333 525.0 observed 1 1
GN109420 Pyrococcus abyssi 47.7477477477478 1332.0 observed 1 1
GN111286 Pyrococcus abyssi 47.1573907839617 1671.0 observed 1 0
GN128456 Pyrococcus abyssi 46.643109540636 849.0 observed 1 1
HB437969 Pyrococcus abyssi 51.9323671497585 414.0 observed 1 1
HB654044 Pyrococcus abyssi 43.8056125941136 1461.0 observed 1 0
HB661594 Pyrococcus abyssi 43.8056125941136 1461.0 observed 1 0
HB663744 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB677861 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB702616 Pyrococcus abyssi 45.9905660377358 1272.0 observed 1 0
HB705510 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB712911 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB733572 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB753149 Pyrococcus abyssi 47.7832512315271 609.0 observed 1 0
HB867881 Pyrococcus abyssi 46.8775344687754 1233.0 observed 1 1
HB868920 Pyrococcus abyssi 48.5838779956427 918.0 observed 1 1
HB870571 Pyrococcus abyssi 48.2758620689655 783.0 observed 1 1
HB871469 Pyrococcus abyssi 45.6053067993367 603.0 observed 1 1
HB880672 Pyrococcus abyssi 47.2622478386167 1041.0 observed 1 1
HB881733 Pyrococcus abyssi 43.9439439439439 999.0 observed 1 1
HB881755 Pyrococcus abyssi 43.3333333333333 1260.0 observed 1 1
HB881767 Pyrococcus abyssi 46.8599033816425 1242.0 observed 1 1
HB883803 Pyrococcus abyssi 46.972860125261 1437.0 observed 1 1
HB886053 Pyrococcus abyssi 45.0121654501217 1233.0 observed 1 1
HB886305 Pyrococcus abyssi 46.7005076142132 1182.0 observed 1 1
HB892208 Pyrococcus abyssi 47.2106961733518 2169.0 observed 1 1
HB892248 Pyrococcus abyssi 43.6363636363636 330.0 observed 1 1
HB896725 Pyrococcus abyssi 42.7469135802469 648.0 observed 1 1
HB899310 Pyrococcus abyssi 43.9439439439439 999.0 observed 1 0
HB899332 Pyrococcus abyssi 43.3333333333333 1260.0 observed 1 0
HB899344 Pyrococcus abyssi 46.8599033816425 1242.0 observed 1 0
HB901234 Pyrococcus abyssi 46.1988304093567 1197.0 observed 1 1
HB901240 Pyrococcus abyssi 46.0683760683761 1170.0 observed 1 1
HB903104 Pyrococcus abyssi 45.6053067993367 603.0 observed 1 0
HB904764 Pyrococcus abyssi 47.2106961733518 2169.0 observed 1 0
HB904804 Pyrococcus abyssi 43.6363636363636 330.0 observed 1 0
HB909353 Pyrococcus abyssi 47.2106961733518 2169.0 observed 1 0
HB909393 Pyrococcus abyssi 43.6363636363636 330.0 observed 1 0
HB912558 Pyrococcus abyssi 42.7469135802469 648.0 observed 1 0
HB913317 Pyrococcus abyssi 46.3589743589744 975.0 observed 1 1
HB913581 Pyrococcus abyssi 49.2537313432836 1005.0 observed 1 1
HB918998 Pyrococcus abyssi 49.0926456542502 1047.0 observed 1 0
HB927123 Pyrococcus abyssi 42.7469135802469 648.0 observed 1 0
HB930760 Pyrococcus abyssi 46.3589743589744 975.0 observed 1 0
HB930798 Pyrococcus abyssi 47.2106961733518 2169.0 observed 1 0
HB930838 Pyrococcus abyssi 43.6363636363636 330.0 observed 1 0
HB931597 Pyrococcus abyssi 49.2537313432836 1005.0 observed 1 0
HB937079 Pyrococcus abyssi 48.2154882154882 1485.0 observed 1 1
HB937930 Pyrococcus abyssi 45.413870246085 447.0 observed 1 1
HB939828 Pyrococcus abyssi 42.2598870056497 885.0 observed 1 1
HB947839 Pyrococcus abyssi 46.3589743589744 975.0 observed 1 0
HB950758 Pyrococcus abyssi 48.2154882154882 1485.0 observed 1 0
HB955046 Pyrococcus abyssi 42.7469135802469 648.0 observed 1 0
HB955460 Pyrococcus abyssi 42.2598870056497 885.0 observed 1 0
HB958370 Pyrococcus abyssi 50.0 1716.0 observed 1 1
HB958929 Pyrococcus abyssi 42.7469135802469 648.0 observed 1 0
HB968597 Pyrococcus abyssi 46.643109540636 849.0 observed 1 0
HC496636 Pyrococcus abyssi 42.3320659062104 789.0 observed 1 1
HC497473 Pyrococcus abyssi 44.6455505279035 663.0 observed 1 1
HC498257 Pyrococcus abyssi 43.9130434782609 690.0 observed 1 1
HC748032 Pyrococcus abyssi 47.3333333333333 1200.0 observed 1 1
HC749098 Pyrococcus abyssi 47.8613569321534 1356.0 observed 1 1

Next page

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 199.819ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT