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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

91 rows where Species_name = "Pyrococcus furiosus dsm 3638"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS302320 Pyrococcus furiosus dsm 3638 40.1129943502825 885.0 observed 1 1
CS497308 Pyrococcus furiosus dsm 3638 41.5962441314554 1065.0 observed 1 0
GN098802 Pyrococcus furiosus dsm 3638 46.027397260274 1095.0 observed 1 1
GN108396 Pyrococcus furiosus dsm 3638 41.130604288499 513.0 observed 1 1
GN108899 Pyrococcus furiosus dsm 3638 40.4825737265416 1119.0 observed 1 1
GN126178 Pyrococcus furiosus dsm 3638 44.0650406504065 615.0 observed 1 1
HB443340 Pyrococcus furiosus dsm 3638 37.4613003095975 1938.0 observed 1 1
HB834520 Pyrococcus furiosus dsm 3638 45.880574452003 1323.0 observed 1 1
HB882019 Pyrococcus furiosus dsm 3638 39.4299287410926 1263.0 observed 1 0
HB886581 Pyrococcus furiosus dsm 3638 40.5086285195277 1101.0 observed 1 1
HB899596 Pyrococcus furiosus dsm 3638 39.4299287410926 1263.0 observed 1 0
HB901776 Pyrococcus furiosus dsm 3638 38.8888888888889 1746.0 observed 1 1
HB901778 Pyrococcus furiosus dsm 3638 38.2268278641336 1737.0 observed 1 1
HB904419 Pyrococcus furiosus dsm 3638 48.3467381590706 1119.0 observed 1 1
HB904421 Pyrococcus furiosus dsm 3638 44.9236298292902 1113.0 observed 1 1
HB904423 Pyrococcus furiosus dsm 3638 42.2459893048128 1122.0 observed 1 1
HB910326 Pyrococcus furiosus dsm 3638 46.027397260274 1095.0 observed 1 0
HB912621 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 1
HB912623 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 1
HB912965 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 1
HB920568 Pyrococcus furiosus dsm 3638 41.8565400843882 1185.0 observed 1 1
HB920570 Pyrococcus furiosus dsm 3638 40.9722222222222 1152.0 observed 1 1
HB920572 Pyrococcus furiosus dsm 3638 38.1165919282511 1338.0 observed 1 1
HB930110 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 0
HB930112 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 0
HB930408 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 0
HB932375 Pyrococcus furiosus dsm 3638 41.2197686645636 951.0 observed 1 1
HB932377 Pyrococcus furiosus dsm 3638 40.4549950544016 1011.0 observed 1 1
HB932379 Pyrococcus furiosus dsm 3638 39.3939393939394 924.0 observed 1 1
HB933284 Pyrococcus furiosus dsm 3638 46.027397260274 1095.0 observed 1 0
HB936360 Pyrococcus furiosus dsm 3638 38.8888888888889 1746.0 observed 1 0
HB936362 Pyrococcus furiosus dsm 3638 38.2268278641336 1737.0 observed 1 0
HB947487 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 0
HB949495 Pyrococcus furiosus dsm 3638 45.6637168141593 1695.0 observed 1 1
HB952716 Pyrococcus furiosus dsm 3638 39.5325203252033 984.0 observed 1 1
HB958190 Pyrococcus furiosus dsm 3638 40.7917383820998 1743.0 observed 1 1
HB959633 Pyrococcus furiosus dsm 3638 42.3007246376812 1104.0 observed 1 0
HB960943 Pyrococcus furiosus dsm 3638 48.3467381590706 1119.0 observed 1 0
HB960945 Pyrococcus furiosus dsm 3638 44.9236298292902 1113.0 observed 1 0
HB960947 Pyrococcus furiosus dsm 3638 42.2459893048128 1122.0 observed 1 0
HB963096 Pyrococcus furiosus dsm 3638 41.2197686645636 951.0 observed 1 0
HB963098 Pyrococcus furiosus dsm 3638 40.4549950544016 1011.0 observed 1 0
HB963100 Pyrococcus furiosus dsm 3638 39.3939393939394 924.0 observed 1 0
HB965128 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 0
HB965130 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 0
HC750531 Pyrococcus furiosus dsm 3638 39.3129770992366 786.0 observed 1 1
HC903420 Pyrococcus furiosus dsm 3638 37.4613003095975 1938.0 observed 1 0
HC904877 Pyrococcus furiosus dsm 3638 42.7304964539007 1128.0 observed 1 1
HC905310 Pyrococcus furiosus dsm 3638 36.5269461077844 501.0 observed 1 1
HC905827 Pyrococcus furiosus dsm 3638 37.4613003095975 1938.0 observed 1 0
HC908977 Pyrococcus furiosus dsm 3638 37.4613003095975 1938.0 observed 1 0
HC910397 Pyrococcus furiosus dsm 3638 38.6524822695035 564.0 observed 1 1
HC915459 Pyrococcus furiosus dsm 3638 36.5269461077844 501.0 observed 1 0
HC915976 Pyrococcus furiosus dsm 3638 37.4613003095975 1938.0 observed 1 0
HC939428 Pyrococcus furiosus dsm 3638 39.4299287410926 1263.0 observed 1 0
HC943990 Pyrococcus furiosus dsm 3638 40.5086285195277 1101.0 observed 1 0
HC957005 Pyrococcus furiosus dsm 3638 39.4299287410926 1263.0 observed 1 0
HC959185 Pyrococcus furiosus dsm 3638 38.8888888888889 1746.0 observed 1 0
HC959187 Pyrococcus furiosus dsm 3638 38.2268278641336 1737.0 observed 1 0
HC961828 Pyrococcus furiosus dsm 3638 48.3467381590706 1119.0 observed 1 0
HC961830 Pyrococcus furiosus dsm 3638 44.9236298292902 1113.0 observed 1 0
HC961832 Pyrococcus furiosus dsm 3638 42.2459893048128 1122.0 observed 1 0
HC967735 Pyrococcus furiosus dsm 3638 46.027397260274 1095.0 observed 1 0
HC970030 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 0
HC970032 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 0
HC970374 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 0
HC977977 Pyrococcus furiosus dsm 3638 41.8565400843882 1185.0 observed 1 0
HC977979 Pyrococcus furiosus dsm 3638 40.9722222222222 1152.0 observed 1 0
HC977981 Pyrococcus furiosus dsm 3638 38.1165919282511 1338.0 observed 1 0
HC987519 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 0
HC987521 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 0
HC987817 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 0
HC989784 Pyrococcus furiosus dsm 3638 41.2197686645636 951.0 observed 1 0
HC989786 Pyrococcus furiosus dsm 3638 40.4549950544016 1011.0 observed 1 0
HC989788 Pyrococcus furiosus dsm 3638 39.3939393939394 924.0 observed 1 0
HC990693 Pyrococcus furiosus dsm 3638 46.027397260274 1095.0 observed 1 0
HC993769 Pyrococcus furiosus dsm 3638 38.8888888888889 1746.0 observed 1 0
HC993771 Pyrococcus furiosus dsm 3638 38.2268278641336 1737.0 observed 1 0
HD004897 Pyrococcus furiosus dsm 3638 43.4871794871795 975.0 observed 1 0
HD006905 Pyrococcus furiosus dsm 3638 45.6637168141593 1695.0 observed 1 0
HD010126 Pyrococcus furiosus dsm 3638 39.5325203252033 984.0 observed 1 0
HD015600 Pyrococcus furiosus dsm 3638 40.7917383820998 1743.0 observed 1 0
HD017043 Pyrococcus furiosus dsm 3638 42.3007246376812 1104.0 observed 1 0
HD018353 Pyrococcus furiosus dsm 3638 48.3467381590706 1119.0 observed 1 0
HD018355 Pyrococcus furiosus dsm 3638 44.9236298292902 1113.0 observed 1 0
HD018357 Pyrococcus furiosus dsm 3638 42.2459893048128 1122.0 observed 1 0
HD020506 Pyrococcus furiosus dsm 3638 41.2197686645636 951.0 observed 1 0
HD020508 Pyrococcus furiosus dsm 3638 40.4549950544016 1011.0 observed 1 0
HD020510 Pyrococcus furiosus dsm 3638 39.3939393939394 924.0 observed 1 0
HD022538 Pyrococcus furiosus dsm 3638 52.3809523809524 1176.0 observed 1 0
HD022540 Pyrococcus furiosus dsm 3638 41.7670682730924 1245.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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