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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

98 rows where Species_name = "Roseovarius nubinhibens ism"

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These facets timed out: Is_annotated

Species_name 1

  • Roseovarius nubinhibens ism · 98 ✖

Sequence_status 1

  • observed 98

Is_protein_coding_sequence 1

  • 1 98
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS497506 Roseovarius nubinhibens ism 67.5568743818002 1011.0 observed 1 1
CS497508 Roseovarius nubinhibens ism 63.716814159292 1017.0 observed 1 1
DI355776 Roseovarius nubinhibens ism 69.1995947315096 987.0 observed 1 1
FB784951 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 1
FB795154 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
FB808045 Roseovarius nubinhibens ism 67.2595520421607 1518.0 observed 1 1
FB836505 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
FB844140 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 1
FB848019 Roseovarius nubinhibens ism 65.1515151515152 1452.0 observed 1 1
FB870512 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 0
FB878980 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
FB883700 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 0
FB894769 Roseovarius nubinhibens ism 65.1515151515152 1452.0 observed 1 0
GM954177 Roseovarius nubinhibens ism 65.6746031746032 1008.0 observed 1 1
GM956364 Roseovarius nubinhibens ism 67.5585284280937 897.0 observed 1 1
GM958300 Roseovarius nubinhibens ism 62.7680311890838 1026.0 observed 1 1
GM959788 Roseovarius nubinhibens ism 63.109895120839 2193.0 observed 1 1
GM960395 Roseovarius nubinhibens ism 68.1917211328976 918.0 observed 1 1
GM961760 Roseovarius nubinhibens ism 63.4146341463415 492.0 observed 1 1
GM961890 Roseovarius nubinhibens ism 63.5761589403973 1359.0 observed 1 1
GN095671 Roseovarius nubinhibens ism 67.7506775067751 1107.0 observed 1 1
GN096900 Roseovarius nubinhibens ism 69.1056910569106 246.0 observed 1 1
GN098095 Roseovarius nubinhibens ism 63.4385964912281 2850.0 observed 1 1
GN098765 Roseovarius nubinhibens ism 61.4334470989761 879.0 observed 1 1
GN101393 Roseovarius nubinhibens ism 67.911877394636 1044.0 observed 1 1
GN102149 Roseovarius nubinhibens ism 62.1052631578947 1425.0 observed 1 1
GN103152 Roseovarius nubinhibens ism 63.1417624521073 1305.0 observed 1 1
GN104402 Roseovarius nubinhibens ism 63.9408099688474 1284.0 observed 1 1
GN105553 Roseovarius nubinhibens ism 64.8261758691207 489.0 observed 1 1
GN106497 Roseovarius nubinhibens ism 65.7250470809793 531.0 observed 1 1
GN108744 Roseovarius nubinhibens ism 67.4846625766871 489.0 observed 1 1
GN109211 Roseovarius nubinhibens ism 67.156862745098 1020.0 observed 1 1
GN109959 Roseovarius nubinhibens ism 70.7482993197279 1029.0 observed 1 1
GN110625 Roseovarius nubinhibens ism 67.911877394636 1044.0 observed 1 0
GN111835 Roseovarius nubinhibens ism 64.5061728395062 324.0 observed 1 1
GN119860 Roseovarius nubinhibens ism 60.4890604890605 777.0 observed 1 1
GN120413 Roseovarius nubinhibens ism 58.9473684210526 285.0 observed 1 1
GN120963 Roseovarius nubinhibens ism 63.5863586358636 1818.0 observed 1 1
GN122024 Roseovarius nubinhibens ism 65.0551314673452 1179.0 observed 1 1
GN122427 Roseovarius nubinhibens ism 62.5916870415648 1227.0 observed 1 1
GN123032 Roseovarius nubinhibens ism 63.9676113360324 741.0 observed 1 1
GN123510 Roseovarius nubinhibens ism 65.9033078880407 786.0 observed 1 1
GN124023 Roseovarius nubinhibens ism 64.0469738030714 1107.0 observed 1 1
GN124099 Roseovarius nubinhibens ism 67.9431072210066 2742.0 observed 1 1
GN125154 Roseovarius nubinhibens ism 61.3382899628253 807.0 observed 1 1
GN125840 Roseovarius nubinhibens ism 65.4320987654321 324.0 observed 1 1
GN127270 Roseovarius nubinhibens ism 63.6453689945518 2019.0 observed 1 1
GN128148 Roseovarius nubinhibens ism 64.9318463444857 807.0 observed 1 1
GN128716 Roseovarius nubinhibens ism 67.9431072210066 2742.0 observed 1 0
GN129625 Roseovarius nubinhibens ism 62.5916870415648 1227.0 observed 1 0
HB437263 Roseovarius nubinhibens ism 57.6388888888889 288.0 observed 1 1
HB437437 Roseovarius nubinhibens ism 61.7948717948718 390.0 observed 1 1
HB438975 Roseovarius nubinhibens ism 68.6909581646424 741.0 observed 1 1
HB440435 Roseovarius nubinhibens ism 68.6909581646424 741.0 observed 1 0
HB655010 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
HB665213 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
HB678104 Roseovarius nubinhibens ism 67.2595520421607 1518.0 observed 1 0
HB706564 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
HB714199 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 0
HB718078 Roseovarius nubinhibens ism 65.1515151515152 1452.0 observed 1 0
HB740571 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 0
HB749039 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
HB753759 Roseovarius nubinhibens ism 63.4920634920635 567.0 observed 1 0
HB764828 Roseovarius nubinhibens ism 65.1515151515152 1452.0 observed 1 0
HB804332 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 1
HB804645 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB805024 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB805902 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB806961 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB808354 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB809827 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB813669 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB814318 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB815533 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB816953 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB817337 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HB817583 Roseovarius nubinhibens ism 63.973063973064 891.0 observed 1 0
HB830390 Roseovarius nubinhibens ism 65.3209109730849 966.0 observed 1 0
HC464046 Roseovarius nubinhibens ism 62.1013133208255 1599.0 observed 1 1
HC495705 Roseovarius nubinhibens ism 68.2194616977226 966.0 observed 1 1
HC495707 Roseovarius nubinhibens ism 63.5658914728682 1032.0 observed 1 1
HC496464 Roseovarius nubinhibens ism 61.6541353383459 1596.0 observed 1 1
HC497203 Roseovarius nubinhibens ism 64.4097222222222 576.0 observed 1 1
HC497979 Roseovarius nubinhibens ism 62.2306717363752 789.0 observed 1 1
HC499038 Roseovarius nubinhibens ism 68.2194616977226 966.0 observed 1 0
HC499040 Roseovarius nubinhibens ism 63.5658914728682 1032.0 observed 1 0
HC505574 Roseovarius nubinhibens ism 61.0009442870633 1059.0 observed 1 1
HC506555 Roseovarius nubinhibens ism 66.2116040955631 879.0 observed 1 1
HC507160 Roseovarius nubinhibens ism 62.5429553264605 1455.0 observed 1 1
HC743348 Roseovarius nubinhibens ism 58.8888888888889 360.0 observed 1 1
HC743875 Roseovarius nubinhibens ism 64.2602495543672 1122.0 observed 1 1
HC744588 Roseovarius nubinhibens ism 66.8513388734995 1083.0 observed 1 1
HC745808 Roseovarius nubinhibens ism 62.2699386503067 978.0 observed 1 1
HC746339 Roseovarius nubinhibens ism 66.8981481481482 1296.0 observed 1 1
HC748264 Roseovarius nubinhibens ism 61.0009442870633 1059.0 observed 1 0
HC748780 Roseovarius nubinhibens ism 64.8967551622419 1356.0 observed 1 1
HC750016 Roseovarius nubinhibens ism 64.4902634593356 2619.0 observed 1 1
HC750773 Roseovarius nubinhibens ism 67.9903730445247 831.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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