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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

12 rows where Species_name = "Sepioteuthis lessoniana"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
JE831378 Sepioteuthis lessoniana 49.0740740740741 1512.0 observed 1 0
JE831379 Sepioteuthis lessoniana 51.7948717948718 390.0 observed 1 0
JE831380 Sepioteuthis lessoniana 52.4875621890547 402.0 observed 1 0
JE831381 Sepioteuthis lessoniana 52.5179856115108 417.0 observed 1 1
JE831382 Sepioteuthis lessoniana 48.5537190082645 1452.0 observed 1 0
JE831383 Sepioteuthis lessoniana 49.2329149232915 717.0 observed 1 1
JE831384 Sepioteuthis lessoniana 50.6600660066007 606.0 observed 1 1
JE831385 Sepioteuthis lessoniana 43.0769230769231 390.0 observed 1 1
JE831386 Sepioteuthis lessoniana 49.8866213151927 441.0 observed 1 1
JE831387 Sepioteuthis lessoniana 48.3234714003945 1014.0 observed 1 1
JE831388 Sepioteuthis lessoniana 50.1567398119122 319.0 observed 1 0
JE831389 Sepioteuthis lessoniana 48.6312399355878 621.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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