Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
604 rows where Species_name = "Shewanella oneidensis"
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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated
Species_name 1
- Shewanella oneidensis · 504 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
HB873531 | Shewanella oneidensis | 46.772068511199 | 4554.0 | observed | 1 | 0 |
HB874015 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB874559 | Shewanella oneidensis | 45.9170013386881 | 747.0 | observed | 1 | 1 |
HB875400 | Shewanella oneidensis | 51.6067146282974 | 2085.0 | observed | 1 | 0 |
HB875402 | Shewanella oneidensis | 46.772068511199 | 4554.0 | observed | 1 | 0 |
HB875836 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 1 |
HB876266 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB877404 | Shewanella oneidensis | 47.5816993464052 | 765.0 | observed | 1 | 1 |
HB877500 | Shewanella oneidensis | 41.2095639943741 | 711.0 | observed | 1 | 1 |
HB877554 | Shewanella oneidensis | 41.2095639943741 | 711.0 | observed | 1 | 0 |
HB877966 | Shewanella oneidensis | 53.954802259887 | 708.0 | observed | 1 | 1 |
HB878278 | Shewanella oneidensis | 54.5454545454545 | 726.0 | observed | 1 | 1 |
HB878280 | Shewanella oneidensis | 46.1645746164575 | 717.0 | observed | 1 | 1 |
HB878282 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HB878660 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB878967 | Shewanella oneidensis | 54.5454545454545 | 726.0 | observed | 1 | 0 |
HB878969 | Shewanella oneidensis | 46.1645746164575 | 717.0 | observed | 1 | 0 |
HB878971 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HB879349 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB879910 | Shewanella oneidensis | 51.6067146282974 | 2085.0 | observed | 1 | 0 |
HB879912 | Shewanella oneidensis | 46.772068511199 | 4554.0 | observed | 1 | 0 |
HB880396 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB880540 | Shewanella oneidensis | 46.0683760683761 | 1170.0 | observed | 1 | 0 |
HB880876 | Shewanella oneidensis | 47.119341563786 | 972.0 | observed | 1 | 1 |
HB880878 | Shewanella oneidensis | 47.7324263038549 | 882.0 | observed | 1 | 1 |
HB881531 | Shewanella oneidensis | 45.9036898061288 | 1599.0 | observed | 1 | 1 |
HB881533 | Shewanella oneidensis | 45.3405017921147 | 1674.0 | observed | 1 | 1 |
HB881535 | Shewanella oneidensis | 48.8288288288288 | 1665.0 | observed | 1 | 1 |
HB881537 | Shewanella oneidensis | 49.6777973052138 | 1707.0 | observed | 1 | 1 |
HB881973 | Shewanella oneidensis | 48.535233570863 | 1263.0 | observed | 1 | 1 |
HB882685 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB883571 | Shewanella oneidensis | 49.3286631640397 | 1713.0 | observed | 1 | 1 |
HB884017 | Shewanella oneidensis | 48.3333333333333 | 1440.0 | observed | 1 | 1 |
HB884961 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB885189 | Shewanella oneidensis | 49.4949494949495 | 1287.0 | observed | 1 | 0 |
HB886523 | Shewanella oneidensis | 51.6074450084602 | 1182.0 | observed | 1 | 1 |
HB886525 | Shewanella oneidensis | 50.8333333333333 | 1200.0 | observed | 1 | 1 |
HB886527 | Shewanella oneidensis | 48.3249581239531 | 1194.0 | observed | 1 | 1 |
HB887345 | Shewanella oneidensis | 45.2 | 750.0 | observed | 1 | 1 |
HB887515 | Shewanella oneidensis | 46.4516129032258 | 465.0 | observed | 1 | 0 |
HB887885 | Shewanella oneidensis | 41.5765069551777 | 1941.0 | observed | 1 | 1 |
HB887887 | Shewanella oneidensis | 45.089058524173 | 1965.0 | observed | 1 | 1 |
HB888645 | Shewanella oneidensis | 51.6067146282974 | 2085.0 | observed | 1 | 0 |
HB888647 | Shewanella oneidensis | 46.772068511199 | 4554.0 | observed | 1 | 0 |
HB888961 | Shewanella oneidensis | 48.6542443064182 | 966.0 | observed | 1 | 1 |
HB889035 | Shewanella oneidensis | 49.4949494949495 | 1287.0 | observed | 1 | 0 |
HB889789 | Shewanella oneidensis | 47.2386587771203 | 1014.0 | observed | 1 | 1 |
HB890176 | Shewanella oneidensis | 47.5816993464052 | 765.0 | observed | 1 | 0 |
HB890550 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB892048 | Shewanella oneidensis | 47.6780185758514 | 969.0 | observed | 1 | 1 |
HB892362 | Shewanella oneidensis | 48.9414081733136 | 2031.0 | observed | 1 | 1 |
HB892650 | Shewanella oneidensis | 49.1830065359477 | 1224.0 | observed | 1 | 0 |
HB892918 | Shewanella oneidensis | 46.0683760683761 | 1170.0 | observed | 1 | 0 |
HB893252 | Shewanella oneidensis | 42.9951690821256 | 207.0 | observed | 1 | 1 |
HB893254 | Shewanella oneidensis | 40.650406504065 | 246.0 | observed | 1 | 0 |
HB893618 | Shewanella oneidensis | 41.5765069551777 | 1941.0 | observed | 1 | 0 |
HB893620 | Shewanella oneidensis | 45.089058524173 | 1965.0 | observed | 1 | 0 |
HB893976 | Shewanella oneidensis | 50.1587301587302 | 315.0 | observed | 1 | 0 |
HB894350 | Shewanella oneidensis | 47.8827361563518 | 921.0 | observed | 1 | 1 |
HB895296 | Shewanella oneidensis | 49.3286631640397 | 1713.0 | observed | 1 | 0 |
HB895999 | Shewanella oneidensis | 46.0683760683761 | 1170.0 | observed | 1 | 0 |
HB896288 | Shewanella oneidensis | 49.8152254249815 | 1353.0 | observed | 1 | 1 |
HB897196 | Shewanella oneidensis | 46.4516129032258 | 465.0 | observed | 1 | 0 |
HB897444 | Shewanella oneidensis | 41.5765069551777 | 1941.0 | observed | 1 | 0 |
HB897446 | Shewanella oneidensis | 45.089058524173 | 1965.0 | observed | 1 | 0 |
HB897934 | Shewanella oneidensis | 52.1021021021021 | 666.0 | observed | 1 | 1 |
HB898331 | Shewanella oneidensis | 47.1726190476191 | 672.0 | observed | 1 | 1 |
HB898624 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB898912 | Shewanella oneidensis | 49.1830065359477 | 1224.0 | observed | 1 | 0 |
HB899205 | Shewanella oneidensis | 45.9207459207459 | 429.0 | observed | 1 | 1 |
HB899550 | Shewanella oneidensis | 48.535233570863 | 1263.0 | observed | 1 | 0 |
HB900003 | Shewanella oneidensis | 47.7045908183633 | 1503.0 | observed | 1 | 1 |
HB901073 | Shewanella oneidensis | 49.8152254249815 | 1353.0 | observed | 1 | 0 |
HB901193 | Shewanella oneidensis | 47.1726190476191 | 672.0 | observed | 1 | 0 |
HB901448 | Shewanella oneidensis | 45.59670781893 | 1215.0 | observed | 1 | 1 |
HB902417 | Shewanella oneidensis | 46.0893854748603 | 1074.0 | observed | 1 | 0 |
HB902705 | Shewanella oneidensis | 49.1830065359477 | 1224.0 | observed | 1 | 0 |
HB903006 | Shewanella oneidensis | 47.7045908183633 | 1503.0 | observed | 1 | 0 |
HB903583 | Shewanella oneidensis | 49.8152254249815 | 1353.0 | observed | 1 | 0 |
HB904918 | Shewanella oneidensis | 48.9414081733136 | 2031.0 | observed | 1 | 0 |
HB905366 | Shewanella oneidensis | 44.5221445221445 | 429.0 | observed | 1 | 1 |
HB906756 | Shewanella oneidensis | 47.6780185758514 | 969.0 | observed | 1 | 0 |
HB907205 | Shewanella oneidensis | 48.780487804878 | 738.0 | observed | 1 | 0 |
HB909000 | Shewanella oneidensis | 47.6780185758514 | 969.0 | observed | 1 | 0 |
HB909304 | Shewanella oneidensis | 47.1726190476191 | 672.0 | observed | 1 | 0 |
HB909507 | Shewanella oneidensis | 48.9414081733136 | 2031.0 | observed | 1 | 0 |
HB910052 | Shewanella oneidensis | 45.9207459207459 | 429.0 | observed | 1 | 0 |
HB910213 | Shewanella oneidensis | 48.6542443064182 | 966.0 | observed | 1 | 0 |
HB911750 | Shewanella oneidensis | 46.9816272965879 | 381.0 | observed | 1 | 1 |
HB914539 | Shewanella oneidensis | 47.7045908183633 | 1503.0 | observed | 1 | 0 |
HB914825 | Shewanella oneidensis | 49.8152254249815 | 1353.0 | observed | 1 | 0 |
HB915653 | Shewanella oneidensis | 46.9816272965879 | 381.0 | observed | 1 | 0 |
HB916858 | Shewanella oneidensis | 48.6542443064182 | 966.0 | observed | 1 | 0 |
HB917974 | Shewanella oneidensis | 49.8152254249815 | 1353.0 | observed | 1 | 0 |
HB919006 | Shewanella oneidensis | 49.2202729044834 | 1026.0 | observed | 1 | 0 |
HB919816 | Shewanella oneidensis | 50.5494505494505 | 1092.0 | observed | 1 | 1 |
HB920202 | Shewanella oneidensis | 47.6780185758514 | 969.0 | observed | 1 | 0 |
HB920407 | Shewanella oneidensis | 47.1726190476191 | 672.0 | observed | 1 | 0 |
HB921454 | Shewanella oneidensis | 51.6067146282974 | 2085.0 | observed | 1 | 0 |
HB921456 | Shewanella oneidensis | 46.772068511199 | 4554.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );