Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
9 rows where Species_name = "Sphingopyxis alaskensis"
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These facets timed out: Sequence_status, Is_protein_coding_sequence, Species_name
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
GN102507 | Sphingopyxis alaskensis | 65.8884565499351 | 1542.0 | observed | 1 | 1 |
GN122769 | Sphingopyxis alaskensis | 62.8899835796388 | 1218.0 | observed | 1 | 1 |
GN128502 | Sphingopyxis alaskensis | 64.9305555555556 | 864.0 | observed | 1 | 1 |
GN129959 | Sphingopyxis alaskensis | 62.8899835796388 | 1218.0 | observed | 1 | 0 |
HB438017 | Sphingopyxis alaskensis | 64.8717948717949 | 390.0 | observed | 1 | 1 |
HC497499 | Sphingopyxis alaskensis | 65.1515151515152 | 660.0 | observed | 1 | 1 |
HC498295 | Sphingopyxis alaskensis | 60.1164483260553 | 687.0 | observed | 1 | 1 |
HC746150 | Sphingopyxis alaskensis | 65.491452991453 | 936.0 | observed | 1 | 1 |
HC749148 | Sphingopyxis alaskensis | 66.6666666666667 | 1335.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );