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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

21 rows where Species_name = "Strongylocentrotus droebachiensis"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB727136 Strongylocentrotus droebachiensis 51.2437810945274 201.0 observed 1 0
FB727138 Strongylocentrotus droebachiensis 53.2338308457711 201.0 observed 1 0
FB727142 Strongylocentrotus droebachiensis 35.5072463768116 690.0 observed 0 0
FB727143 Strongylocentrotus droebachiensis 33.6363636363636 660.0 observed 0 0
FB727144 Strongylocentrotus droebachiensis 38.5201305767138 919.0 observed 0 0
FB727145 Strongylocentrotus droebachiensis 37.8136200716846 558.0 observed 0 0
FB727146 Strongylocentrotus droebachiensis 36.5107913669065 556.0 observed 0 0
FB727149 Strongylocentrotus droebachiensis 47.972972972973 148.0 observed 0 0
FB727150 Strongylocentrotus droebachiensis 46.6216216216216 148.0 observed 0 0
FB727151 Strongylocentrotus droebachiensis 41.6666666666667 156.0 observed 1 0
FB727152 Strongylocentrotus droebachiensis 42.1383647798742 159.0 observed 1 0
FB727153 Strongylocentrotus droebachiensis 39.3188854489164 969.0 observed 0 0
FB727154 Strongylocentrotus droebachiensis 39.1489361702128 940.0 observed 0 0
FB727155 Strongylocentrotus droebachiensis 39.0425531914894 940.0 observed 0 0
FB727156 Strongylocentrotus droebachiensis 46.1672473867596 574.0 observed 0 0
FB727157 Strongylocentrotus droebachiensis 34.6014492753623 1104.0 observed 0 0
FB727158 Strongylocentrotus droebachiensis 33.3004926108374 1015.0 observed 0 0
FB727159 Strongylocentrotus droebachiensis 39.1465677179963 539.0 observed 0 0
FB727160 Strongylocentrotus droebachiensis 38.3742911153119 529.0 observed 0 0
FB727166 Strongylocentrotus droebachiensis 38.9417989417989 945.0 observed 0 0
FB727167 Strongylocentrotus droebachiensis 52.1994134897361 682.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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