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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

112 rows where Species_name = "Strongylocentrotus purpuratus"

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These facets timed out: Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_status 1

  • observed 112
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS497346 Strongylocentrotus purpuratus 47.1153846153846 1248.0 observed 1 0
CS497348 Strongylocentrotus purpuratus 44.6789797713281 1137.0 observed 1 0
CS497350 Strongylocentrotus purpuratus 52.987012987013 1155.0 observed 1 0
CS497352 Strongylocentrotus purpuratus 52.6406926406926 1155.0 observed 1 0
CS673538 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
CS690921 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
DM198265 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
DM367859 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
FB334590 Strongylocentrotus purpuratus 57.258064516129 372.0 observed 1 0
FB334592 Strongylocentrotus purpuratus 56.1827956989247 372.0 observed 1 1
FB334622 Strongylocentrotus purpuratus 52.4416135881104 471.0 observed 1 0
FB334624 Strongylocentrotus purpuratus 56.7204301075269 372.0 observed 1 0
FB334730 Strongylocentrotus purpuratus 57.258064516129 372.0 observed 1 0
FB335776 Strongylocentrotus purpuratus 61.8004866180049 411.0 observed 1 1
FB336101 Strongylocentrotus purpuratus 45.5882352941176 1224.0 observed 1 0
FB336517 Strongylocentrotus purpuratus 44.0 300.0 observed 1 0
FB336519 Strongylocentrotus purpuratus 44.017094017094 234.0 observed 1 0
FB336521 Strongylocentrotus purpuratus 43.4456928838951 267.0 observed 1 0
FB336523 Strongylocentrotus purpuratus 48.3870967741936 372.0 observed 1 0
FB336649 Strongylocentrotus purpuratus 44.478527607362 978.0 observed 1 0
FB336762 Strongylocentrotus purpuratus 44.9477351916376 861.0 observed 1 0
FB336764 Strongylocentrotus purpuratus 52.575315840622 1029.0 observed 1 0
FB665674 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
FU264890 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
FU268573 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
FW343816 Strongylocentrotus purpuratus 43.6698717948718 1248.0 observed 1 0
GM706886 Strongylocentrotus purpuratus 50.8449883449883 3432.0 observed 1 0
GN079517 Strongylocentrotus purpuratus 47.7430555555556 576.0 observed 1 0
GN079519 Strongylocentrotus purpuratus 43.0051813471503 579.0 observed 1 1
GN079521 Strongylocentrotus purpuratus 49.6563573883162 582.0 observed 1 0
GN079523 Strongylocentrotus purpuratus 48.6042692939245 609.0 observed 1 0
GN079651 Strongylocentrotus purpuratus 44.2735042735043 585.0 observed 1 0
GN080171 Strongylocentrotus purpuratus 48.8773747841105 579.0 observed 1 0
GN110327 Strongylocentrotus purpuratus 52.1472392638037 489.0 observed 1 0
GN110536 Strongylocentrotus purpuratus 46.4344941956882 603.0 observed 1 0
GN111430 Strongylocentrotus purpuratus 45.2599388379205 327.0 observed 1 0
GN111592 Strongylocentrotus purpuratus 48.3739837398374 492.0 observed 1 0
GN123316 Strongylocentrotus purpuratus 49.0990990990991 888.0 observed 1 0
GN123366 Strongylocentrotus purpuratus 44.4055944055944 858.0 observed 1 0
GN123827 Strongylocentrotus purpuratus 46.8844984802432 1316.0 observed 0 0
GN124063 Strongylocentrotus purpuratus 50.5212510024058 3741.0 observed 1 0
GN126938 Strongylocentrotus purpuratus 53.4611288604899 1878.0 observed 1 0
GN128680 Strongylocentrotus purpuratus 50.5212510024058 3741.0 observed 1 0
HB437349 Strongylocentrotus purpuratus 57.0175438596491 456.0 observed 1 1
HB438246 Strongylocentrotus purpuratus 43.1818181818182 924.0 observed 1 0
HB438753 Strongylocentrotus purpuratus 44.4316877152698 871.0 observed 0 0
HB438755 Strongylocentrotus purpuratus 44.7779111644658 833.0 observed 0 0
HB438843 Strongylocentrotus purpuratus 46.7643467643468 819.0 observed 1 0
HB439366 Strongylocentrotus purpuratus 39.3162393162393 234.0 observed 1 0
HB439960 Strongylocentrotus purpuratus 48.2371794871795 624.0 observed 0 0
HB440213 Strongylocentrotus purpuratus 44.4316877152698 871.0 observed 0 0
HB440215 Strongylocentrotus purpuratus 44.7779111644658 833.0 observed 0 0
HB440303 Strongylocentrotus purpuratus 46.7643467643468 819.0 observed 1 0
HB440826 Strongylocentrotus purpuratus 39.3162393162393 234.0 observed 1 0
HB872499 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HB874137 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HB874970 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HB886885 Strongylocentrotus purpuratus 45.7906712172924 1758.0 observed 0 0
HB903052 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HC495375 Strongylocentrotus purpuratus 48.0874316939891 1098.0 observed 1 0
HC496566 Strongylocentrotus purpuratus 46.7365967365967 858.0 observed 1 0
HC496582 Strongylocentrotus purpuratus 47.2027972027972 858.0 observed 1 0
HC496700 Strongylocentrotus purpuratus 46.3414634146341 615.0 observed 1 0
HC497097 Strongylocentrotus purpuratus 52.0 750.0 observed 1 0
HC497099 Strongylocentrotus purpuratus 52.0491803278688 732.0 observed 1 0
HC497101 Strongylocentrotus purpuratus 51.5027322404372 732.0 observed 1 0
HC497143 Strongylocentrotus purpuratus 44.4947209653092 663.0 observed 1 0
HC497145 Strongylocentrotus purpuratus 51.6 750.0 observed 1 0
HC498388 Strongylocentrotus purpuratus 44.8198198198198 1776.0 observed 1 0
HC498718 Strongylocentrotus purpuratus 48.0874316939891 1098.0 observed 1 0
HC507453 Strongylocentrotus purpuratus 52.1472392638037 489.0 observed 1 0
HC746265 Strongylocentrotus purpuratus 54.6597312527091 2307.0 observed 1 0
HC747370 Strongylocentrotus purpuratus 48.536036036036 1776.0 observed 1 0
HC747720 Strongylocentrotus purpuratus 47.5225225225225 1332.0 observed 1 0
HC750591 Strongylocentrotus purpuratus 48.8567990373045 831.0 observed 1 0
HC752810 Strongylocentrotus purpuratus 46.9161469161469 1443.0 observed 1 0
HC752812 Strongylocentrotus purpuratus 46.8812877263582 1491.0 observed 1 0
HC752814 Strongylocentrotus purpuratus 47.1651090342679 1605.0 observed 1 0
HC752968 Strongylocentrotus purpuratus 47.2061657032755 1557.0 observed 1 0
HC754067 Strongylocentrotus purpuratus 46.1006289308176 1590.0 observed 1 0
HC929908 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HC931546 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HC932379 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HC944294 Strongylocentrotus purpuratus 45.7906712172924 1758.0 observed 0 0
HC960461 Strongylocentrotus purpuratus 49.7512437810945 603.0 observed 1 0
HH765929 Strongylocentrotus purpuratus 57.258064516129 372.0 observed 1 0
HH765931 Strongylocentrotus purpuratus 56.1827956989247 372.0 observed 1 0
HH765961 Strongylocentrotus purpuratus 52.4416135881104 471.0 observed 1 0
HH765963 Strongylocentrotus purpuratus 56.7204301075269 372.0 observed 1 0
HH766069 Strongylocentrotus purpuratus 57.258064516129 372.0 observed 1 0
HH767115 Strongylocentrotus purpuratus 61.8004866180049 411.0 observed 1 0
HH767440 Strongylocentrotus purpuratus 45.5882352941176 1224.0 observed 1 0
HH767856 Strongylocentrotus purpuratus 44.0 300.0 observed 1 0
HH767858 Strongylocentrotus purpuratus 44.017094017094 234.0 observed 1 0
HH767860 Strongylocentrotus purpuratus 43.4456928838951 267.0 observed 1 0
HH767862 Strongylocentrotus purpuratus 48.3870967741936 372.0 observed 1 0
HH767988 Strongylocentrotus purpuratus 44.478527607362 978.0 observed 1 0
HH768101 Strongylocentrotus purpuratus 44.9477351916376 861.0 observed 1 0
HH768103 Strongylocentrotus purpuratus 52.575315840622 1029.0 observed 1 0
HH769150 Strongylocentrotus purpuratus 48.0719794344473 1167.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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