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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

92 rows where Species_name = "Sulfitobacter sp. ee-36"

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Is_annotated 2

  • 1 52
  • 0 40

Species_name 1

  • Sulfitobacter sp. ee-36 · 92 ✖

Sequence_status 1

  • observed 92

Is_protein_coding_sequence 1

  • 1 92
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB784949 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 1
FB795152 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
FB808043 Sulfitobacter sp. ee-36 62.9117259552042 1518.0 observed 1 1
FB836503 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
FB844138 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 1
FB845186 Sulfitobacter sp. ee-36 61.6869918699187 984.0 observed 1 1
FB848017 Sulfitobacter sp. ee-36 60.7214428857715 1497.0 observed 1 1
FB870510 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 0
FB878978 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
FB883698 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 0
FB894767 Sulfitobacter sp. ee-36 60.7214428857715 1497.0 observed 1 0
GM953169 Sulfitobacter sp. ee-36 64.4607843137255 408.0 observed 1 1
GM954175 Sulfitobacter sp. ee-36 61.6564417177914 978.0 observed 1 1
GM956362 Sulfitobacter sp. ee-36 65.0118203309693 846.0 observed 1 1
GM958142 Sulfitobacter sp. ee-36 61.0606060606061 1320.0 observed 1 1
GM958298 Sulfitobacter sp. ee-36 61.2068965517241 1044.0 observed 1 1
GM959786 Sulfitobacter sp. ee-36 62.5227686703097 2196.0 observed 1 1
GM961045 Sulfitobacter sp. ee-36 63.9429312581064 771.0 observed 1 1
GM961888 Sulfitobacter sp. ee-36 62.1780721118469 1359.0 observed 1 1
GM962281 Sulfitobacter sp. ee-36 63.9429312581064 771.0 observed 1 0
GN095669 Sulfitobacter sp. ee-36 63.6936936936937 1110.0 observed 1 1
GN096898 Sulfitobacter sp. ee-36 57.7235772357724 246.0 observed 1 1
GN097484 Sulfitobacter sp. ee-36 62.4043715846995 915.0 observed 1 1
GN098093 Sulfitobacter sp. ee-36 61.6385372714487 2844.0 observed 1 1
GN099063 Sulfitobacter sp. ee-36 62.010582010582 945.0 observed 1 1
GN100657 Sulfitobacter sp. ee-36 59.3544137022398 1518.0 observed 1 1
GN101391 Sulfitobacter sp. ee-36 64.8674242424242 1056.0 observed 1 1
GN102147 Sulfitobacter sp. ee-36 56.3508771929825 1425.0 observed 1 1
GN105205 Sulfitobacter sp. ee-36 59.6069868995633 1374.0 observed 1 0
GN105551 Sulfitobacter sp. ee-36 61.9631901840491 489.0 observed 1 1
GN106495 Sulfitobacter sp. ee-36 59.69868173258 531.0 observed 1 1
GN108742 Sulfitobacter sp. ee-36 63.1901840490798 489.0 observed 1 1
GN109209 Sulfitobacter sp. ee-36 62.0111731843575 1074.0 observed 1 1
GN110209 Sulfitobacter sp. ee-36 62.010582010582 945.0 observed 1 0
GN110623 Sulfitobacter sp. ee-36 64.8674242424242 1056.0 observed 1 0
GN119858 Sulfitobacter sp. ee-36 57.1428571428571 777.0 observed 1 1
GN120961 Sulfitobacter sp. ee-36 60.5610561056106 1818.0 observed 1 1
GN122020 Sulfitobacter sp. ee-36 62.6160337552743 1185.0 observed 1 1
GN122022 Sulfitobacter sp. ee-36 66.412213740458 1179.0 observed 1 1
GN122425 Sulfitobacter sp. ee-36 57.5757575757576 1221.0 observed 1 1
GN123504 Sulfitobacter sp. ee-36 57.6969696969697 825.0 observed 1 1
GN123506 Sulfitobacter sp. ee-36 60.4166666666667 768.0 observed 1 0
GN123508 Sulfitobacter sp. ee-36 59.8717948717949 780.0 observed 1 1
GN124021 Sulfitobacter sp. ee-36 61.455525606469 1113.0 observed 1 1
GN124097 Sulfitobacter sp. ee-36 65.6113537117904 2748.0 observed 1 1
GN125152 Sulfitobacter sp. ee-36 59.4890510948905 822.0 observed 1 1
GN126113 Sulfitobacter sp. ee-36 68.3375104427736 1197.0 observed 1 1
GN127268 Sulfitobacter sp. ee-36 63.1455399061033 2130.0 observed 1 1
GN128146 Sulfitobacter sp. ee-36 62.43961352657 828.0 observed 1 1
GN128714 Sulfitobacter sp. ee-36 65.6113537117904 2748.0 observed 1 0
GN129623 Sulfitobacter sp. ee-36 57.5757575757576 1221.0 observed 1 0
HB655008 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
HB665211 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
HB678102 Sulfitobacter sp. ee-36 62.9117259552042 1518.0 observed 1 0
HB706562 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
HB714197 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 0
HB715245 Sulfitobacter sp. ee-36 61.6869918699187 984.0 observed 1 0
HB718076 Sulfitobacter sp. ee-36 60.7214428857715 1497.0 observed 1 0
HB740569 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 0
HB749037 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
HB753757 Sulfitobacter sp. ee-36 62.2103386809269 561.0 observed 1 0
HB764826 Sulfitobacter sp. ee-36 60.7214428857715 1497.0 observed 1 0
HB804330 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 1
HB804643 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB805022 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB805900 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB806959 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB808352 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB809825 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB813667 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB814316 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB815531 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB816951 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB817335 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HB817581 Sulfitobacter sp. ee-36 62.8635346756152 894.0 observed 1 0
HB830388 Sulfitobacter sp. ee-36 61.6666666666667 1020.0 observed 1 0
HC463128 Sulfitobacter sp. ee-36 61.4325068870523 1452.0 observed 1 1
HC495701 Sulfitobacter sp. ee-36 60.0966183574879 1035.0 observed 1 1
HC495703 Sulfitobacter sp. ee-36 63.627730294397 1053.0 observed 1 1
HC496462 Sulfitobacter sp. ee-36 57.7694235588972 1596.0 observed 1 1
HC497977 Sulfitobacter sp. ee-36 58.0481622306717 789.0 observed 1 1
HC499034 Sulfitobacter sp. ee-36 60.0966183574879 1035.0 observed 1 0
HC499036 Sulfitobacter sp. ee-36 63.627730294397 1053.0 observed 1 0
HC505572 Sulfitobacter sp. ee-36 56.9561157796452 1071.0 observed 1 1
HC507158 Sulfitobacter sp. ee-36 60.4081632653061 1470.0 observed 1 1
HC743346 Sulfitobacter sp. ee-36 56.6666666666667 360.0 observed 1 1
HC743873 Sulfitobacter sp. ee-36 61.6487455197133 1116.0 observed 1 1
HC744586 Sulfitobacter sp. ee-36 62.5457875457875 1092.0 observed 1 1
HC745806 Sulfitobacter sp. ee-36 60.6540084388186 948.0 observed 1 1
HC748262 Sulfitobacter sp. ee-36 56.9561157796452 1071.0 observed 1 0
HC750014 Sulfitobacter sp. ee-36 61.2767584097859 2616.0 observed 1 1
HC750771 Sulfitobacter sp. ee-36 63.2352941176471 816.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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