home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

252 rows where Species_name = "Synechococcus elongatus pcc 7942 = fachb-805"

✎ View and edit SQL

This data as json, CSV (advanced)

These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS064280 Synechococcus elongatus pcc 7942 = fachb-805 48.5148514851485 303.0 observed 1 1
CS064281 Synechococcus elongatus pcc 7942 = fachb-805 49.6212121212121 264.0 observed 1 1
DI394141 Synechococcus elongatus pcc 7942 = fachb-805 53.448275862069 2204.0 observed 0 0
DI394163 Synechococcus elongatus pcc 7942 = fachb-805 53.1065088757396 676.0 observed 0 0
DI394166 Synechococcus elongatus pcc 7942 = fachb-805 47.6683937823834 579.0 observed 0 0
DI394200 Synechococcus elongatus pcc 7942 = fachb-805 57.9022988505747 1392.0 observed 1 0
DI394220 Synechococcus elongatus pcc 7942 = fachb-805 56.3622170179547 1281.0 observed 0 0
DJ066789 Synechococcus elongatus pcc 7942 = fachb-805 55.3166069295102 837.0 observed 1 1
FB708256 Synechococcus elongatus pcc 7942 = fachb-805 58.1333333333333 750.0 observed 1 1
FB764110 Synechococcus elongatus pcc 7942 = fachb-805 56.7864271457086 1002.0 observed 1 1
FB784893 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 1
FB795096 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
FB805480 Synechococcus elongatus pcc 7942 = fachb-805 57.542908762421 1107.0 observed 1 1
FB832206 Synechococcus elongatus pcc 7942 = fachb-805 56.1056105610561 1515.0 observed 1 1
FB836447 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
FB845120 Synechococcus elongatus pcc 7942 = fachb-805 57.1980676328502 1035.0 observed 1 1
FB853355 Synechococcus elongatus pcc 7942 = fachb-805 56.1056105610561 1515.0 observed 1 0
FB878922 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
FB903203 Synechococcus elongatus pcc 7942 = fachb-805 56.8817204301075 1860.0 observed 1 1
GM954789 Synechococcus elongatus pcc 7942 = fachb-805 56.8075117370892 1065.0 observed 1 1
GM959728 Synechococcus elongatus pcc 7942 = fachb-805 55.5555555555556 2196.0 observed 1 1
GN042131 Synechococcus elongatus pcc 7942 = fachb-805 57.0081709616593 3182.0 observed 0 0
GN096576 Synechococcus elongatus pcc 7942 = fachb-805 56.8075117370892 1065.0 observed 1 0
GN098031 Synechococcus elongatus pcc 7942 = fachb-805 58.4206848357792 2862.0 observed 1 1
GN098900 Synechococcus elongatus pcc 7942 = fachb-805 59.6938775510204 1176.0 observed 1 1
GN108622 Synechococcus elongatus pcc 7942 = fachb-805 58.8938714499253 669.0 observed 1 1
GN109836 Synechococcus elongatus pcc 7942 = fachb-805 58.974358974359 702.0 observed 1 1
GN117412 Synechococcus elongatus pcc 7942 = fachb-805 54.5530492898914 1197.0 observed 1 1
GN117414 Synechococcus elongatus pcc 7942 = fachb-805 59.8148148148148 1080.0 observed 1 1
GN118968 Synechococcus elongatus pcc 7942 = fachb-805 55.2724699221515 1413.0 observed 1 1
GN120847 Synechococcus elongatus pcc 7942 = fachb-805 55.4069119286511 1794.0 observed 1 1
GN124731 Synechococcus elongatus pcc 7942 = fachb-805 58.2389937106918 795.0 observed 1 1
GN128937 Synechococcus elongatus pcc 7942 = fachb-805 54.5530492898914 1197.0 observed 1 0
GN128939 Synechococcus elongatus pcc 7942 = fachb-805 59.8148148148148 1080.0 observed 1 0
GN129258 Synechococcus elongatus pcc 7942 = fachb-805 55.2724699221515 1413.0 observed 1 0
HB439444 Synechococcus elongatus pcc 7942 = fachb-805 58.9496248660236 933.0 observed 1 1
HB654952 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
HB665155 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
HB675539 Synechococcus elongatus pcc 7942 = fachb-805 57.542908762421 1107.0 observed 1 0
HB702265 Synechococcus elongatus pcc 7942 = fachb-805 56.1056105610561 1515.0 observed 1 0
HB706506 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
HB715179 Synechococcus elongatus pcc 7942 = fachb-805 57.1980676328502 1035.0 observed 1 0
HB723414 Synechococcus elongatus pcc 7942 = fachb-805 56.1056105610561 1515.0 observed 1 0
HB748981 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
HB773262 Synechococcus elongatus pcc 7942 = fachb-805 56.8817204301075 1860.0 observed 1 0
HB802923 Synechococcus elongatus pcc 7942 = fachb-805 56.8817204301075 1860.0 observed 1 0
HB812632 Synechococcus elongatus pcc 7942 = fachb-805 58.5903083700441 1362.0 observed 1 1
HB817525 Synechococcus elongatus pcc 7942 = fachb-805 59.0146750524109 954.0 observed 1 0
HB817952 Synechococcus elongatus pcc 7942 = fachb-805 56.1056105610561 1515.0 observed 1 0
HB823675 Synechococcus elongatus pcc 7942 = fachb-805 57.542908762421 1107.0 observed 1 0
HB897728 Synechococcus elongatus pcc 7942 = fachb-805 57.0336391437309 654.0 observed 1 1
HB899861 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 1
HB902006 Synechococcus elongatus pcc 7942 = fachb-805 54.786036036036 1776.0 observed 1 1
HB902864 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB904593 Synechococcus elongatus pcc 7942 = fachb-805 57.9744816586922 1254.0 observed 1 1
HB905122 Synechococcus elongatus pcc 7942 = fachb-805 55.3990610328638 426.0 observed 1 1
HB907384 Synechococcus elongatus pcc 7942 = fachb-805 57.1980676328502 1035.0 observed 1 0
HB910664 Synechococcus elongatus pcc 7942 = fachb-805 59.6938775510204 1176.0 observed 1 0
HB912729 Synechococcus elongatus pcc 7942 = fachb-805 57.5174825174825 1716.0 observed 1 1
HB912731 Synechococcus elongatus pcc 7942 = fachb-805 53.960113960114 1755.0 observed 1 1
HB914397 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB917569 Synechococcus elongatus pcc 7942 = fachb-805 59.2332865825152 2139.0 observed 1 1
HB917571 Synechococcus elongatus pcc 7942 = fachb-805 59.5591542959964 2223.0 observed 1 1
HB921835 Synechococcus elongatus pcc 7942 = fachb-805 55.3990610328638 426.0 observed 1 0
HB924080 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB924738 Synechococcus elongatus pcc 7942 = fachb-805 59.2332865825152 2139.0 observed 1 0
HB924740 Synechococcus elongatus pcc 7942 = fachb-805 59.5591542959964 2223.0 observed 1 0
HB930218 Synechococcus elongatus pcc 7942 = fachb-805 57.5174825174825 1716.0 observed 1 0
HB930220 Synechococcus elongatus pcc 7942 = fachb-805 53.960113960114 1755.0 observed 1 0
HB933622 Synechococcus elongatus pcc 7942 = fachb-805 59.6938775510204 1176.0 observed 1 0
HB934141 Synechococcus elongatus pcc 7942 = fachb-805 56.0344827586207 696.0 observed 1 1
HB936590 Synechococcus elongatus pcc 7942 = fachb-805 54.786036036036 1776.0 observed 1 0
HB940366 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB941116 Synechococcus elongatus pcc 7942 = fachb-805 55.9562841530055 915.0 observed 1 1
HB944282 Synechococcus elongatus pcc 7942 = fachb-805 57.0336391437309 654.0 observed 1 0
HB946172 Synechococcus elongatus pcc 7942 = fachb-805 55.7025834908633 1587.0 observed 1 1
HB950073 Synechococcus elongatus pcc 7942 = fachb-805 56.0344827586207 696.0 observed 1 0
HB950954 Synechococcus elongatus pcc 7942 = fachb-805 55.3990610328638 426.0 observed 1 0
HB951374 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB957374 Synechococcus elongatus pcc 7942 = fachb-805 57.4257425742574 1515.0 observed 1 0
HB957750 Synechococcus elongatus pcc 7942 = fachb-805 56.1357702349869 1149.0 observed 1 1
HB959695 Synechococcus elongatus pcc 7942 = fachb-805 55.8876811594203 1104.0 observed 1 1
HB960628 Synechococcus elongatus pcc 7942 = fachb-805 59.2332865825152 2139.0 observed 1 0
HB960630 Synechococcus elongatus pcc 7942 = fachb-805 59.5591542959964 2223.0 observed 1 0
HB961117 Synechococcus elongatus pcc 7942 = fachb-805 57.9744816586922 1254.0 observed 1 0
HB963876 Synechococcus elongatus pcc 7942 = fachb-805 56.0344827586207 696.0 observed 1 0
HB964702 Synechococcus elongatus pcc 7942 = fachb-805 57.1980676328502 1035.0 observed 1 0
HB965236 Synechococcus elongatus pcc 7942 = fachb-805 57.5174825174825 1716.0 observed 1 0
HB965238 Synechococcus elongatus pcc 7942 = fachb-805 53.960113960114 1755.0 observed 1 0
HB973277 Synechococcus elongatus pcc 7942 = fachb-805 55.2592592592593 675.0 observed 1 1
HC495547 Synechococcus elongatus pcc 7942 = fachb-805 56.8686868686869 990.0 observed 1 1
HC495549 Synechococcus elongatus pcc 7942 = fachb-805 57.0151921358356 1119.0 observed 1 1
HC495551 Synechococcus elongatus pcc 7942 = fachb-805 55.5223880597015 1005.0 observed 1 1
HC496168 Synechococcus elongatus pcc 7942 = fachb-805 59.1836734693878 882.0 observed 1 1
HC498888 Synechococcus elongatus pcc 7942 = fachb-805 56.8686868686869 990.0 observed 1 0
HC498890 Synechococcus elongatus pcc 7942 = fachb-805 57.0151921358356 1119.0 observed 1 0
HC498892 Synechococcus elongatus pcc 7942 = fachb-805 55.5223880597015 1005.0 observed 1 0
HC745762 Synechococcus elongatus pcc 7942 = fachb-805 56.3758389261745 894.0 observed 1 1
HC745764 Synechococcus elongatus pcc 7942 = fachb-805 59.0811965811966 936.0 observed 1 1
HC749908 Synechococcus elongatus pcc 7942 = fachb-805 50.6410256410256 2652.0 observed 1 1

Next page

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 4800.235ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT