Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
911 rows where Species_name = "Synechococcus sp."
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| GM966605 | Synechococcus sp. | 57.87728026534 | 603.0 | observed | 1 | 1 |
| GN042133 | Synechococcus sp. | 52.3092369477912 | 2988.0 | observed | 1 | 1 |
| GN042573 | Synechococcus sp. | 62.2739018087855 | 1548.0 | observed | 1 | 1 |
| GN077366 | Synechococcus sp. | 61.6519174041298 | 339.0 | observed | 1 | 1 |
| GN089886 | Synechococcus sp. | 50.5078485687904 | 1083.0 | observed | 1 | 1 |
| GN095558 | Synechococcus sp. | 61.1464968152866 | 471.0 | observed | 1 | 1 |
| GN095560 | Synechococcus sp. | 61.8421052631579 | 456.0 | observed | 1 | 1 |
| GN095841 | Synechococcus sp. | 55.4357592093441 | 1113.0 | observed | 1 | 1 |
| GN095843 | Synechococcus sp. | 55.2536231884058 | 1104.0 | observed | 1 | 1 |
| GN095845 | Synechococcus sp. | 66.2011173184357 | 1074.0 | observed | 1 | 0 |
| GN098289 | Synechococcus sp. | 62.5 | 2880.0 | observed | 1 | 0 |
| GN102221 | Synechococcus sp. | 51.5840220385675 | 1452.0 | observed | 1 | 1 |
| GN120165 | Synechococcus sp. | 58.5344057193923 | 1119.0 | observed | 1 | 1 |
| GN120167 | Synechococcus sp. | 64.4021739130435 | 1104.0 | observed | 1 | 0 |
| GN122799 | Synechococcus sp. | 56.691604322527 | 1203.0 | observed | 1 | 1 |
| GN122801 | Synechococcus sp. | 61.7986798679868 | 1212.0 | observed | 1 | 1 |
| GN122803 | Synechococcus sp. | 55.9701492537313 | 1206.0 | observed | 1 | 1 |
| GN122805 | Synechococcus sp. | 60.4785478547855 | 1212.0 | observed | 1 | 1 |
| GN125236 | Synechococcus sp. | 49.8644986449864 | 738.0 | observed | 1 | 0 |
| GN125300 | Synechococcus sp. | 58.0952380952381 | 735.0 | observed | 1 | 1 |
| GN125312 | Synechococcus sp. | 56.5625 | 960.0 | observed | 1 | 1 |
| GN128522 | Synechococcus sp. | 59.3556381660471 | 807.0 | observed | 1 | 1 |
| GN128524 | Synechococcus sp. | 64.4278606965174 | 804.0 | observed | 1 | 0 |
| GN128526 | Synechococcus sp. | 63.4803921568627 | 816.0 | observed | 1 | 1 |
| GN129989 | Synechococcus sp. | 56.691604322527 | 1203.0 | observed | 1 | 0 |
| GN129991 | Synechococcus sp. | 61.7986798679868 | 1212.0 | observed | 1 | 0 |
| GN129993 | Synechococcus sp. | 55.9701492537313 | 1206.0 | observed | 1 | 0 |
| GN129995 | Synechococcus sp. | 60.4785478547855 | 1212.0 | observed | 1 | 0 |
| HB438039 | Synechococcus sp. | 59.7964376590331 | 393.0 | observed | 1 | 1 |
| HB438041 | Synechococcus sp. | 61.5776081424936 | 393.0 | observed | 1 | 1 |
| HB438043 | Synechococcus sp. | 56.234096692112 | 393.0 | observed | 1 | 1 |
| HB438045 | Synechococcus sp. | 62.086513994911 | 393.0 | observed | 1 | 1 |
| HB443943 | Synechococcus sp. | 61.2987012987013 | 1155.0 | observed | 1 | 0 |
| HB444181 | Synechococcus sp. | 58.1740976645435 | 942.0 | observed | 1 | 1 |
| HB651119 | Synechococcus sp. | 51.1481481481482 | 2700.0 | observed | 0 | 0 |
| HB654172 | Synechococcus sp. | 59.7042513863216 | 1623.0 | observed | 1 | 0 |
| HB655106 | Synechococcus sp. | 59.2808551992225 | 1029.0 | observed | 1 | 0 |
| HB655108 | Synechococcus sp. | 63.0952380952381 | 1092.0 | observed | 1 | 0 |
| HB661722 | Synechococcus sp. | 59.7042513863216 | 1623.0 | observed | 1 | 0 |
| HB662116 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB665309 | Synechococcus sp. | 59.2808551992225 | 1029.0 | observed | 1 | 0 |
| HB665311 | Synechococcus sp. | 63.0952380952381 | 1092.0 | observed | 1 | 0 |
| HB670260 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB678300 | Synechococcus sp. | 57.473420888055 | 1599.0 | observed | 1 | 0 |
| HB678302 | Synechococcus sp. | 63.1740196078431 | 1632.0 | observed | 1 | 0 |
| HB683066 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB704463 | Synechococcus sp. | 57.9365079365079 | 378.0 | observed | 1 | 0 |
| HB706660 | Synechococcus sp. | 59.2808551992225 | 1029.0 | observed | 1 | 0 |
| HB706662 | Synechococcus sp. | 63.0952380952381 | 1092.0 | observed | 1 | 0 |
| HB715343 | Synechococcus sp. | 57.1980676328502 | 1035.0 | observed | 1 | 0 |
| HB721733 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB738412 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB745553 | Synechococcus sp. | 51.1481481481482 | 2700.0 | observed | 0 | 0 |
| HB749135 | Synechococcus sp. | 59.2808551992225 | 1029.0 | observed | 1 | 0 |
| HB749137 | Synechococcus sp. | 63.0952380952381 | 1092.0 | observed | 1 | 0 |
| HB757502 | Synechococcus sp. | 51.6516516516517 | 999.0 | observed | 1 | 0 |
| HB766937 | Synechococcus sp. | 51.1481481481482 | 2700.0 | observed | 0 | 0 |
| HB817679 | Synechococcus sp. | 59.2808551992225 | 1029.0 | observed | 1 | 0 |
| HB817681 | Synechococcus sp. | 63.0952380952381 | 1092.0 | observed | 1 | 0 |
| HB818425 | Synechococcus sp. | 51.1481481481482 | 2700.0 | observed | 0 | 0 |
| HB820194 | Synechococcus sp. | 57.9365079365079 | 378.0 | observed | 1 | 0 |
| HB869827 | Synechococcus sp. | 62.5984251968504 | 1524.0 | observed | 1 | 0 |
| HB870151 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 1 |
| HB870193 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 1 |
| HB871011 | Synechococcus sp. | 60.6933333333333 | 1875.0 | observed | 1 | 1 |
| HB871013 | Synechococcus sp. | 58.3594566353187 | 1914.0 | observed | 1 | 1 |
| HB871015 | Synechococcus sp. | 61.525974025974 | 1848.0 | observed | 1 | 1 |
| HB871287 | Synechococcus sp. | 59.8099117447386 | 1473.0 | observed | 1 | 0 |
| HB872091 | Synechococcus sp. | 56.6813509544787 | 1362.0 | observed | 1 | 1 |
| HB872125 | Synechococcus sp. | 63.1031922791388 | 1347.0 | observed | 1 | 1 |
| HB872723 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB872765 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
| HB873351 | Synechococcus sp. | 56.6813509544787 | 1362.0 | observed | 1 | 0 |
| HB873385 | Synechococcus sp. | 63.1031922791388 | 1347.0 | observed | 1 | 0 |
| HB873847 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB873889 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
| HB874475 | Synechococcus sp. | 63.6122177954847 | 753.0 | observed | 1 | 1 |
| HB875222 | Synechococcus sp. | 56.6813509544787 | 1362.0 | observed | 1 | 0 |
| HB875256 | Synechococcus sp. | 63.1031922791388 | 1347.0 | observed | 1 | 0 |
| HB875708 | Synechococcus sp. | 56.4599483204134 | 774.0 | observed | 1 | 1 |
| HB875732 | Synechococcus sp. | 58.8652482269504 | 705.0 | observed | 1 | 1 |
| HB875750 | Synechococcus sp. | 61.0441767068273 | 747.0 | observed | 1 | 1 |
| HB875752 | Synechococcus sp. | 60.0282485875706 | 708.0 | observed | 1 | 0 |
| HB876098 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB876140 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
| HB877348 | Synechococcus sp. | 64.9944258639911 | 897.0 | observed | 1 | 1 |
| HB878154 | Synechococcus sp. | 56.4599483204134 | 774.0 | observed | 1 | 0 |
| HB878180 | Synechococcus sp. | 58.8652482269504 | 705.0 | observed | 1 | 0 |
| HB878192 | Synechococcus sp. | 60.0282485875706 | 708.0 | observed | 1 | 0 |
| HB878492 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB878534 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
| HB878843 | Synechococcus sp. | 56.4599483204134 | 774.0 | observed | 1 | 0 |
| HB878869 | Synechococcus sp. | 58.8652482269504 | 705.0 | observed | 1 | 0 |
| HB878881 | Synechococcus sp. | 60.0282485875706 | 708.0 | observed | 1 | 0 |
| HB879181 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB879223 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
| HB879732 | Synechococcus sp. | 56.6813509544787 | 1362.0 | observed | 1 | 0 |
| HB879766 | Synechococcus sp. | 63.1031922791388 | 1347.0 | observed | 1 | 0 |
| HB880228 | Synechococcus sp. | 52.7220630372493 | 1047.0 | observed | 1 | 0 |
| HB880270 | Synechococcus sp. | 62.145390070922 | 1128.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);