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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

86 rows where Species_name = "Tachypleus tridentatus"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated

Species_name 1

  • Tachypleus tridentatus · 86 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX763473 Tachypleus tridentatus 39.1573729863693 807.0 observed 1 1
BD306319 Tachypleus tridentatus 39.1573729863693 807.0 observed 1 0
CS423579 Tachypleus tridentatus 40.165128703254 2059.0 observed 1 1
CS423581 Tachypleus tridentatus 35.0718467269824 1879.0 observed 0 0
DD421685 Tachypleus tridentatus 40.165128703254 2059.0 observed 1 0
DD421686 Tachypleus tridentatus 35.0718467269824 1879.0 observed 0 0
DJ493150 Tachypleus tridentatus 42.3717521652232 1501.0 observed 0 0
DJ493151 Tachypleus tridentatus 42.8446771378709 1146.0 observed 1 0
DJ493162 Tachypleus tridentatus 39.8516163222046 1887.0 observed 0 0
DJ493163 Tachypleus tridentatus 37.3851294903927 2394.0 observed 0 0
DJ493164 Tachypleus tridentatus 35.3208691258211 1979.0 observed 0 0
DJ493165 Tachypleus tridentatus 39.782916470033 2119.0 observed 1 0
HW579482 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 1
HW579484 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 1
HW579485 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 1
HW579486 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 1
HW675243 Tachypleus tridentatus 42.3717521652232 1501.0 observed 0 0
HW675244 Tachypleus tridentatus 42.8446771378709 1146.0 observed 1 1
HW675255 Tachypleus tridentatus 39.8516163222046 1887.0 observed 0 0
HW675256 Tachypleus tridentatus 37.3851294903927 2394.0 observed 0 0
HW675257 Tachypleus tridentatus 35.3208691258211 1979.0 observed 0 0
HW675258 Tachypleus tridentatus 39.782916470033 2119.0 observed 1 1
HZ489097 Tachypleus tridentatus 46.747149564051 2982.0 observed 1 1
JB412580 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
JB412582 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
JB412584 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
JB412586 Tachypleus tridentatus 46.7186484730344 3078.0 observed 1 1
JB412587 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
JB412588 Tachypleus tridentatus 60.9929078014184 1128.0 observed 1 1
JC573449 Tachypleus tridentatus 46.747149564051 2982.0 observed 1 0
LG087171 Tachypleus tridentatus 46.747149564051 2982.0 observed 1 0
LP789584 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
LP789586 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
LP789588 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
LP789590 Tachypleus tridentatus 46.7186484730344 3078.0 observed 1 0
LP789591 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
LP789592 Tachypleus tridentatus 60.9929078014184 1128.0 observed 1 0
LQ949553 Tachypleus tridentatus 46.747149564051 2982.0 observed 1 0
LX074651 Tachypleus tridentatus 42.3717521652232 1501.0 observed 0 0
LX074652 Tachypleus tridentatus 42.8446771378709 1146.0 observed 1 0
LX074663 Tachypleus tridentatus 39.8516163222046 1887.0 observed 0 0
LX074664 Tachypleus tridentatus 37.3851294903927 2394.0 observed 0 0
LX074665 Tachypleus tridentatus 35.3208691258211 1979.0 observed 0 0
LX074666 Tachypleus tridentatus 39.782916470033 2119.0 observed 1 0
MA626404 Tachypleus tridentatus 45.9684123025769 1203.0 observed 1 1
MA626410 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MA626413 Tachypleus tridentatus 42.7304964539007 1128.0 observed 1 1
MB445407 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MB445408 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MB445409 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
MB445410 Tachypleus tridentatus 46.7186484730344 3078.0 observed 1 0
MB445411 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MB445412 Tachypleus tridentatus 60.9929078014184 1128.0 observed 1 0
MC428752 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MC428754 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MC428755 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
MC428756 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MD388299 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MD388301 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MD388302 Tachypleus tridentatus 42.7304964539007 1128.0 observed 1 0
MD388303 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MP099163 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MP099167 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MP099169 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
MP099171 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MP245750 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MP245752 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MP245754 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
MP245756 Tachypleus tridentatus 46.7186484730344 3078.0 observed 1 0
MP245757 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MP245758 Tachypleus tridentatus 60.9929078014184 1128.0 observed 1 0
MP447781 Tachypleus tridentatus 45.9684123025769 1203.0 observed 1 0
MP447791 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MP447797 Tachypleus tridentatus 42.7304964539007 1128.0 observed 1 0
MP672686 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MP672690 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MP672692 Tachypleus tridentatus 42.6418439716312 1128.0 observed 1 0
MP672694 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
MQ142514 Tachypleus tridentatus 46.7320261437908 3060.0 observed 1 0
MQ142518 Tachypleus tridentatus 45.8852867830424 1203.0 observed 1 0
MQ142520 Tachypleus tridentatus 42.7304964539007 1128.0 observed 1 0
MQ142522 Tachypleus tridentatus 61.5128844555278 1203.0 observed 1 0
PA267475 Tachypleus tridentatus 38.971315529179 2022.0 observed 1 1
PA498992 Tachypleus tridentatus 52.3581899298917 3138.0 observed 1 1
PA498993 Tachypleus tridentatus 47.3512632436838 1227.0 observed 1 0
PA498994 Tachypleus tridentatus 44.6180555555556 1152.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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