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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

593 rows where Species_name = "Thermotoga maritima"

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These facets timed out: Is_protein_coding_sequence, Is_annotated

Species_name 1

  • Thermotoga maritima · 593 ✖

Sequence_status 1

  • observed 593
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX048576 Thermotoga maritima 62.0786516853933 356.0 observed 1 0
AX048577 Thermotoga maritima 62.0786516853933 356.0 observed 1 0
AX128445 Thermotoga maritima 46.6666666666667 270.0 observed 1 1
AX363413 Thermotoga maritima 44.2528735632184 174.0 observed 0 0
AX392263 Thermotoga maritima 48.4480431848853 741.0 observed 1 1
AX392832 Thermotoga maritima 49.3670886075949 1659.0 observed 1 1
AX700680 Thermotoga maritima 46.8181818181818 660.0 observed 1 1
AX924302 Thermotoga maritima 45.8240119313945 2682.0 observed 1 0
BD142140 Thermotoga maritima 43.8375350140056 714.0 observed 1 0
BD142767 Thermotoga maritima 43.8375350140056 714.0 observed 1 0
BD308196 Thermotoga maritima 46.6666666666667 270.0 observed 1 0
BD391350 Thermotoga maritima 45.8240119313945 2682.0 observed 1 0
BD395492 Thermotoga maritima 62.0786516853933 356.0 observed 1 0
BD395493 Thermotoga maritima 62.0786516853933 356.0 observed 1 0
BD412614 Thermotoga maritima 49.400479616307 1668.0 observed 1 0
BD412615 Thermotoga maritima 49.3881546744983 2043.0 observed 1 0
BD412618 Thermotoga maritima 47.2617507546356 2319.0 observed 1 0
BD445249 Thermotoga maritima 49.3670886075949 1659.0 observed 1 0
BD453967 Thermotoga maritima 45.4545454545455 990.0 observed 1 1
BD453968 Thermotoga maritima 45.4545454545455 990.0 observed 1 0
BD454045 Thermotoga maritima 45.4708520179372 1115.0 observed 0 0
BD454048 Thermotoga maritima 46.8939393939394 2640.0 observed 0 0
BD454049 Thermotoga maritima 45.9090909090909 1980.0 observed 0 0
CQ794526 Thermotoga maritima 49.1879350348028 1293.0 observed 1 1
CQ893499 Thermotoga maritima 47.3222530009234 2166.0 observed 1 1
CQ893504 Thermotoga maritima 49.400479616307 1668.0 observed 1 1
CQ893505 Thermotoga maritima 49.3881546744983 2043.0 observed 1 0
CQ893508 Thermotoga maritima 47.2617507546356 2319.0 observed 1 1
CS052711 Thermotoga maritima 60.6382978723404 564.0 observed 1 1
CS052713 Thermotoga maritima 60.6382978723404 564.0 observed 1 0
CS176824 Thermotoga maritima 44.0422322775264 663.0 observed 1 0
CS318833 Thermotoga maritima 46.2081128747795 567.0 observed 1 1
CS362706 Thermotoga maritima 50.9859154929577 1065.0 observed 1 1
CS362720 Thermotoga maritima 52.7777777777778 36.0 observed 0 0
CS362721 Thermotoga maritima 45.9459459459459 37.0 observed 0 0
CS476429 Thermotoga maritima 47.2556894243641 747.0 observed 1 0
CS497618 Thermotoga maritima 46.5388711395101 939.0 observed 1 1
DD023594 Thermotoga maritima 51.1470985155196 741.0 observed 1 1
DD118425 Thermotoga maritima 49.4949494949495 198.0 observed 1 1
DD143242 Thermotoga maritima 63.6704119850187 1335.0 observed 1 1
DD143247 Thermotoga maritima 63.2496513249651 1434.0 observed 1 0
DD143249 Thermotoga maritima 63.4843205574913 1435.0 observed 0 0
DD153141 Thermotoga maritima 49.4949494949495 198.0 observed 1 0
DD234858 Thermotoga maritima 46.4876033057851 1452.0 observed 1 1
DD236496 Thermotoga maritima 47.2556894243641 747.0 observed 1 0
DD283327 Thermotoga maritima 49.1879350348028 1293.0 observed 1 0
DD309596 Thermotoga maritima 25.3465346534653 505.0 observed 0 0
DD452806 Thermotoga maritima 47.2556894243641 747.0 observed 1 0
DI172714 Thermotoga maritima 46.1097461097461 1221.0 observed 1 1
DI499662 Thermotoga maritima 48.4454085321764 1383.0 observed 1 0
DI499663 Thermotoga maritima 48.6144101346002 1263.0 observed 1 0
DI499664 Thermotoga maritima 45.9907223326706 1509.0 observed 1 0
DI499665 Thermotoga maritima 49.1926182237601 1734.0 observed 1 0
DI499666 Thermotoga maritima 49.2957746478873 1278.0 observed 1 0
DI499667 Thermotoga maritima 47.4164133738602 987.0 observed 1 0
DI499668 Thermotoga maritima 47.6782752902156 1206.0 observed 1 0
DJ011565 Thermotoga maritima 60.6382978723404 564.0 observed 1 0
DJ086416 Thermotoga maritima 60.6382978723404 564.0 observed 1 0
DJ418034 Thermotoga maritima 63.6704119850187 1335.0 observed 1 0
DJ418039 Thermotoga maritima 63.2496513249651 1434.0 observed 1 0
DJ418041 Thermotoga maritima 63.4843205574913 1435.0 observed 0 0
DJ437393 Thermotoga maritima 44.0422322775264 663.0 observed 1 0
DL075298 Thermotoga maritima 47.3684210526316 570.0 observed 1 1
DM170999 Thermotoga maritima 47.2556894243641 747.0 observed 1 0
FB335572 Thermotoga maritima 44.8717948717949 702.0 observed 1 1
FB718580 Thermotoga maritima 47.6190476190476 1491.0 observed 1 1
FB718918 Thermotoga maritima 47.6190476190476 1491.0 observed 1 0
FB719260 Thermotoga maritima 50.8409785932722 1308.0 observed 1 1
FB784117 Thermotoga maritima 51.2970168612192 1542.0 observed 1 1
FB791667 Thermotoga maritima 51.2970168612192 1542.0 observed 1 0
FW553239 Thermotoga maritima 46.2081128747795 567.0 observed 1 0
GM683183 Thermotoga maritima 47.3222530009234 2166.0 observed 1 0
GM683188 Thermotoga maritima 49.400479616307 1668.0 observed 1 0
GM683189 Thermotoga maritima 49.3881546744983 2043.0 observed 1 0
GM683192 Thermotoga maritima 47.2617507546356 2319.0 observed 1 0
GM953649 Thermotoga maritima 49.5726495726496 468.0 observed 1 1
GM959128 Thermotoga maritima 47.7124183006536 1377.0 observed 1 1
GM961926 Thermotoga maritima 48.1818181818182 1320.0 observed 1 1
GM987503 Thermotoga maritima 43.8375350140056 714.0 observed 1 0
GN060304 Thermotoga maritima 47.2556894243641 747.0 observed 1 0
GN101165 Thermotoga maritima 49.2957746478873 1278.0 observed 1 0
GN102521 Thermotoga maritima 49.7214484679666 1436.0 observed 0 0
GN108828 Thermotoga maritima 47.8682170542636 516.0 observed 1 1
GN122813 Thermotoga maritima 48.6991869918699 1230.0 observed 1 1
GN125940 Thermotoga maritima 38.9949109414758 1572.0 observed 1 1
GN130001 Thermotoga maritima 48.6991869918699 1230.0 observed 1 0
HB438053 Thermotoga maritima 47.0737913486005 393.0 observed 1 1
HB439151 Thermotoga maritima 51.1470985155196 741.0 observed 1 0
HB439165 Thermotoga maritima 46.5608465608466 756.0 observed 1 1
HB440611 Thermotoga maritima 51.1470985155196 741.0 observed 1 0
HB440625 Thermotoga maritima 46.5608465608466 756.0 observed 1 0
HB443779 Thermotoga maritima 48.7777777777778 900.0 observed 1 1
HB443783 Thermotoga maritima 50.0925925925926 1080.0 observed 1 1
HB461948 Thermotoga maritima 44.3181818181818 1056.0 observed 1 1
HB654176 Thermotoga maritima 51.2970168612192 1542.0 observed 1 0
HB661726 Thermotoga maritima 51.2970168612192 1542.0 observed 1 0
HB867420 Thermotoga maritima 44.3181818181818 1056.0 observed 1 0
HB869186 Thermotoga maritima 41.7004048582996 741.0 observed 1 1
HB869507 Thermotoga maritima 42.6877470355731 759.0 observed 1 1
HB869591 Thermotoga maritima 41.7004048582996 741.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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