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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

89 rows where Species_name = "Thermotoga neapolitana"

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Suggested facets: GC_content

These facets timed out: Sequence_status

Is_protein_coding_sequence 2

  • 1 86
  • 0 3

Is_annotated 2

  • 0 62
  • 1 27

Species_name 1

  • Thermotoga neapolitana · 89 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX428956 Thermotoga neapolitana 49.6649916247906 1194.0 observed 1 1
AX936044 Thermotoga neapolitana 60.8695652173913 23.0 observed 0 0
AX936045 Thermotoga neapolitana 46.5648854961832 1310.0 observed 1 1
DD143243 Thermotoga neapolitana 64.0449438202247 1335.0 observed 1 1
DD143248 Thermotoga neapolitana 63.5983263598326 1434.0 observed 1 0
DD143250 Thermotoga neapolitana 63.7883008356546 1436.0 observed 0 0
DJ418035 Thermotoga neapolitana 64.0449438202247 1335.0 observed 1 0
DJ418040 Thermotoga neapolitana 63.5983263598326 1434.0 observed 1 0
DJ418042 Thermotoga neapolitana 63.7883008356546 1436.0 observed 0 0
FW367089 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
GM619307 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
GM619685 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
GN095996 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 1
GN102219 Thermotoga neapolitana 51.2437810945274 1407.0 observed 1 1
HB393365 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HB443630 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 0
HB443700 Thermotoga neapolitana 46.7268623024831 1329.0 observed 1 1
HB952806 Thermotoga neapolitana 48.9028213166144 957.0 observed 1 1
HB971228 Thermotoga neapolitana 48.6531986531987 594.0 observed 1 1
HB973148 Thermotoga neapolitana 49.2134831460674 1335.0 observed 1 1
HC036407 Thermotoga neapolitana 48.8389513108614 1335.0 observed 1 0
HC459885 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC497515 Thermotoga neapolitana 45.8521870286576 663.0 observed 1 1
HC687884 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687887 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HC687935 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687938 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HC687944 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687945 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687946 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687947 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC687978 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HC688195 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC688198 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HC688293 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC688619 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HC688622 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HC903710 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 0
HC903780 Thermotoga neapolitana 46.7268623024831 1329.0 observed 1 0
HC906117 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 0
HC906187 Thermotoga neapolitana 46.7268623024831 1329.0 observed 1 0
HC909267 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 0
HC909337 Thermotoga neapolitana 46.7268623024831 1329.0 observed 1 0
HC916266 Thermotoga neapolitana 46.723044397463 1419.0 observed 1 0
HC916336 Thermotoga neapolitana 46.7268623024831 1329.0 observed 1 0
HD010216 Thermotoga neapolitana 48.9028213166144 957.0 observed 1 0
HD028638 Thermotoga neapolitana 48.6531986531987 594.0 observed 1 0
HD030558 Thermotoga neapolitana 49.2134831460674 1335.0 observed 1 0
HI070972 Thermotoga neapolitana 52.2494887525562 978.0 observed 1 1
HV037170 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 1
HV192768 Thermotoga neapolitana 49.3807215939688 1857.0 observed 1 0
HV192769 Thermotoga neapolitana 48.6756621689155 2001.0 observed 1 1
HV445101 Thermotoga neapolitana 48.8389513108614 1335.0 observed 1 1
HV699529 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 1
HV699530 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 1
HV699531 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 1
HV699532 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 1
HV699555 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 1
HV699730 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HV700549 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HV700552 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HV700587 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HV700590 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HV700625 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HV700628 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HV700649 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HV700652 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
HV704479 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HW504933 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HW523595 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HW828921 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
HW828971 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
JC184324 Thermotoga neapolitana 53.1697341513293 978.0 observed 1 0
LG072700 Thermotoga neapolitana 50.972501676727 1491.0 observed 1 1
LG072701 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 1
LG072702 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 1
LG072703 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 1
LG072704 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 1
LP996672 Thermotoga neapolitana 43.6704119850187 1335.0 observed 1 1
LP998411 Thermotoga neapolitana 43.6704119850187 1335.0 observed 1 1
LQ316110 Thermotoga neapolitana 46.6113416320885 1446.0 observed 1 1
LQ707006 Thermotoga neapolitana 43.6704119850187 1335.0 observed 1 0
LX151274 Thermotoga neapolitana 52.6584867075665 978.0 observed 1 0
LY503320 Thermotoga neapolitana 50.972501676727 1491.0 observed 1 0
LY503321 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 0
LY503322 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 0
LY503323 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 0
LY503324 Thermotoga neapolitana 51.0395707578806 1491.0 observed 1 0
OF125047 Thermotoga neapolitana 48.8389513108614 1335.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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