Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
112 rows where Species_name = "Vibrio antiquarius"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| FB332715 | Vibrio antiquarius | 45.1388888888889 | 1152.0 | observed | 1 | 1 |
| FB333130 | Vibrio antiquarius | 38.5593220338983 | 708.0 | observed | 1 | 1 |
| FB333948 | Vibrio antiquarius | 46.7365967365967 | 858.0 | observed | 1 | 1 |
| FB333950 | Vibrio antiquarius | 46.1375661375661 | 1890.0 | observed | 1 | 1 |
| FB784937 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 1 |
| FB795140 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| FB808033 | Vibrio antiquarius | 48.5975212002609 | 1533.0 | observed | 1 | 1 |
| FB836491 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| FB845174 | Vibrio antiquarius | 47.3942969518191 | 1017.0 | observed | 1 | 1 |
| FB867127 | Vibrio antiquarius | 47.43961352657 | 1035.0 | observed | 1 | 1 |
| FB878966 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| FB898813 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 1 |
| FB903280 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| FB910961 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| FB929044 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| GM953167 | Vibrio antiquarius | 44.0639269406393 | 438.0 | observed | 1 | 1 |
| GM954023 | Vibrio antiquarius | 44.9905482041588 | 1587.0 | observed | 1 | 1 |
| GM954222 | Vibrio antiquarius | 45.0 | 1620.0 | observed | 1 | 1 |
| GM954831 | Vibrio antiquarius | 45.5621301775148 | 1014.0 | observed | 1 | 1 |
| GM955171 | Vibrio antiquarius | 44.3502824858757 | 354.0 | observed | 1 | 1 |
| GM955944 | Vibrio antiquarius | 47.4006116207951 | 654.0 | observed | 1 | 1 |
| GM956232 | Vibrio antiquarius | 43.2478632478633 | 1755.0 | observed | 1 | 1 |
| GM956816 | Vibrio antiquarius | 46.6666666666667 | 510.0 | observed | 1 | 1 |
| GM957035 | Vibrio antiquarius | 46.4285714285714 | 1092.0 | observed | 1 | 1 |
| GM957158 | Vibrio antiquarius | 45.7846952010376 | 771.0 | observed | 1 | 1 |
| GM957275 | Vibrio antiquarius | 47.0 | 600.0 | observed | 1 | 1 |
| GM957358 | Vibrio antiquarius | 46.5083798882682 | 2148.0 | observed | 1 | 1 |
| GM958292 | Vibrio antiquarius | 46.2209302325581 | 1032.0 | observed | 1 | 1 |
| GM958519 | Vibrio antiquarius | 46.0251046025105 | 717.0 | observed | 1 | 1 |
| GM958621 | Vibrio antiquarius | 48.0459770114943 | 1740.0 | observed | 1 | 1 |
| GM958739 | Vibrio antiquarius | 44.5098039215686 | 510.0 | observed | 1 | 1 |
| GM958958 | Vibrio antiquarius | 42.5324675324675 | 924.0 | observed | 1 | 1 |
| GM959075 | Vibrio antiquarius | 44.212962962963 | 2160.0 | observed | 1 | 1 |
| GM959354 | Vibrio antiquarius | 45.3168044077135 | 1452.0 | observed | 1 | 1 |
| GM960857 | Vibrio antiquarius | 42.8355957767722 | 663.0 | observed | 1 | 1 |
| GM960946 | Vibrio antiquarius | 46.7365967365967 | 858.0 | observed | 1 | 0 |
| GM961187 | Vibrio antiquarius | 45.1355661881978 | 1254.0 | observed | 1 | 1 |
| GM961613 | Vibrio antiquarius | 47.5877192982456 | 456.0 | observed | 1 | 1 |
| GM962209 | Vibrio antiquarius | 43.2478632478633 | 1755.0 | observed | 1 | 0 |
| GM962457 | Vibrio antiquarius | 46.5083798882682 | 2148.0 | observed | 1 | 0 |
| GM962777 | Vibrio antiquarius | 45.3168044077135 | 1452.0 | observed | 1 | 0 |
| GN095440 | Vibrio antiquarius | 44.212962962963 | 432.0 | observed | 1 | 1 |
| GN095695 | Vibrio antiquarius | 48.5964912280702 | 1140.0 | observed | 1 | 1 |
| GN096099 | Vibrio antiquarius | 44.4961240310078 | 645.0 | observed | 1 | 1 |
| GN096686 | Vibrio antiquarius | 45.5621301775148 | 1014.0 | observed | 1 | 0 |
| GN096688 | Vibrio antiquarius | 45.4038997214485 | 1077.0 | observed | 1 | 1 |
| GN096910 | Vibrio antiquarius | 43.4108527131783 | 258.0 | observed | 1 | 1 |
| GN096998 | Vibrio antiquarius | 47.2924187725632 | 1662.0 | observed | 1 | 1 |
| GN097806 | Vibrio antiquarius | 46.2901439645626 | 903.0 | observed | 1 | 1 |
| GN097855 | Vibrio antiquarius | 46.4539007092199 | 1128.0 | observed | 1 | 1 |
| GN098127 | Vibrio antiquarius | 48.8656195462478 | 2865.0 | observed | 1 | 1 |
| GN098936 | Vibrio antiquarius | 42.169728783902 | 1143.0 | observed | 1 | 1 |
| GN099075 | Vibrio antiquarius | 44.9523809523809 | 1050.0 | observed | 1 | 1 |
| GN104432 | Vibrio antiquarius | 48.3796296296296 | 1296.0 | observed | 1 | 1 |
| GN105571 | Vibrio antiquarius | 46.6244725738397 | 474.0 | observed | 1 | 1 |
| GN105573 | Vibrio antiquarius | 43.0051813471503 | 579.0 | observed | 1 | 1 |
| GN106523 | Vibrio antiquarius | 44.6886446886447 | 546.0 | observed | 1 | 1 |
| GN107929 | Vibrio antiquarius | 47.6525821596244 | 1704.0 | observed | 1 | 1 |
| GN109243 | Vibrio antiquarius | 50.354609929078 | 1128.0 | observed | 1 | 1 |
| GN109896 | Vibrio antiquarius | 46.5378421900161 | 621.0 | observed | 1 | 1 |
| GN109963 | Vibrio antiquarius | 49.4716618635927 | 1041.0 | observed | 1 | 1 |
| GN110221 | Vibrio antiquarius | 44.9523809523809 | 1050.0 | observed | 1 | 0 |
| GN117263 | Vibrio antiquarius | 47.4842767295598 | 1272.0 | observed | 1 | 1 |
| GN117454 | Vibrio antiquarius | 47.0914127423823 | 1083.0 | observed | 1 | 0 |
| GN119630 | Vibrio antiquarius | 46.2011418533158 | 2277.0 | observed | 1 | 1 |
| GN120993 | Vibrio antiquarius | 48.1967213114754 | 1830.0 | observed | 1 | 1 |
| GN122044 | Vibrio antiquarius | 45.6666666666667 | 1200.0 | observed | 1 | 1 |
| GN122461 | Vibrio antiquarius | 47.8189300411523 | 1215.0 | observed | 1 | 1 |
| GN123058 | Vibrio antiquarius | 42.5641025641026 | 780.0 | observed | 1 | 1 |
| GN123707 | Vibrio antiquarius | 47.2972972972973 | 222.0 | observed | 1 | 1 |
| GN124348 | Vibrio antiquarius | 45.9770114942529 | 696.0 | observed | 1 | 1 |
| GN125184 | Vibrio antiquarius | 50.1216545012165 | 822.0 | observed | 1 | 1 |
| GN125848 | Vibrio antiquarius | 45.1851851851852 | 405.0 | observed | 1 | 1 |
| GN127296 | Vibrio antiquarius | 49.478390461997 | 2013.0 | observed | 1 | 1 |
| GN127298 | Vibrio antiquarius | 49.2971887550201 | 1992.0 | observed | 1 | 1 |
| GN127677 | Vibrio antiquarius | 46.9483568075117 | 639.0 | observed | 1 | 1 |
| GN128979 | Vibrio antiquarius | 47.0914127423823 | 1083.0 | observed | 1 | 0 |
| GN129659 | Vibrio antiquarius | 47.8189300411523 | 1215.0 | observed | 1 | 0 |
| HB438601 | Vibrio antiquarius | 38.5593220338983 | 708.0 | observed | 1 | 0 |
| HB654996 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| HB665199 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| HB678092 | Vibrio antiquarius | 48.5975212002609 | 1533.0 | observed | 1 | 0 |
| HB706550 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| HB715233 | Vibrio antiquarius | 47.3942969518191 | 1017.0 | observed | 1 | 0 |
| HB737186 | Vibrio antiquarius | 47.43961352657 | 1035.0 | observed | 1 | 0 |
| HB749025 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| HB768872 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| HB773339 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| HB781020 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| HB799103 | Vibrio antiquarius | 45.1576576576577 | 888.0 | observed | 1 | 0 |
| HB817569 | Vibrio antiquarius | 49.2374727668845 | 918.0 | observed | 1 | 0 |
| HC464054 | Vibrio antiquarius | 46.1019030079804 | 1629.0 | observed | 1 | 1 |
| HC496476 | Vibrio antiquarius | 46.6342254663423 | 1233.0 | observed | 1 | 1 |
| HC497221 | Vibrio antiquarius | 44.4961240310078 | 645.0 | observed | 1 | 0 |
| HC498001 | Vibrio antiquarius | 47.0319634703196 | 657.0 | observed | 1 | 1 |
| HC505086 | Vibrio antiquarius | 38.5593220338983 | 708.0 | observed | 1 | 0 |
| HC505358 | Vibrio antiquarius | 44.7322970639033 | 579.0 | observed | 1 | 1 |
| HC505446 | Vibrio antiquarius | 46.4539007092199 | 1128.0 | observed | 1 | 0 |
| HC505972 | Vibrio antiquarius | 44.017094017094 | 1872.0 | observed | 1 | 1 |
| HC506368 | Vibrio antiquarius | 45.7875457875458 | 546.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);